Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 3e-14 seq1 87.8 1e-12 >seq7 Length=431226 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 |||||| || || ||| ||| || ||||| ||||| ||||| || ||| | | || || Sbjct 275127 CACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACCATCCTC 275068 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 | ||||||||||||||| || |||| ||| || || | || | || || ||||| Sbjct 275067 AAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTG 275008 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||||| || ||| | | || || || | ||| ||||||| || || || || Sbjct 275007 GATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCTT 274948 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 ||||| | || || ||||| ||||||||| || Sbjct 274947 ACCCGTGAGGGTCTTAACAAAGATCTGCATCTTG 274914 >seq1 Length=3147266 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || || ||| || ||||| ||||| || || || ||| | | || Sbjct 843456 CAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATC 843397 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||||||||||||||| || |||| ||| || || | || | ||||||||||| Sbjct 843396 TTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTC 843337 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| || || | | || || || | ||| ||||| | ||||| || Sbjct 843336 CTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGT 843277 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || || || ||||| ||||| Sbjct 843276 CTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || ||| ||| || ||||| ||||| || || || ||| | | || Sbjct 843000 CAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCTACCATC 842941 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||||||||||||||| || |||| ||| ||||| | || | ||||||||||| Sbjct 842940 CTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTTGTC 842881 Query 48674 GCTAATCTT 48682 |||||| Sbjct 842880 CTGAATCTT 842872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937544287876