Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 168 3e-37 seq6 149 3e-31 >seq5 Length=1593029 Score = 168 bits (186), Expect = 3e-37 Identities = 238/333 (71%), Gaps = 6/333 (2%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 || ||||| || || ||| || ||| || ||||||||| ||||| |||| |||||| Sbjct 214240 ATCTGGACTAAACAAGCACCATTCTTCATCTTTCTCAACTTTTTCCATGAATAGATCTGG 214299 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||| | ||||| || ||||| | |||||||| ||||| ||||| |||||||| | Sbjct 214300 GATCCATAGAGCATAGAACAAATCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCT 214359 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 || | ||||||||| | | ||| | ||||||||||| |||||||| ||||| ||| Sbjct 214360 TAAGTTTAAGAAATCCATCACATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACC 214419 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| || ||||||||||| || ||||||||||| | ||| || ||| | | ||| Sbjct 214420 TGGTCTCTTATTACCACCTTGATCAACATATCTTGCAGTGTTATTAAACACTCTAAGCAT 214479 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 || || | || ||||| || |||| | ||| | | || || |||||||| Sbjct 214480 AGGTACGATACCGTTTGAAGTACCATTTGATCCGGCAATGTATGCACCAGTGGATCTAAT 214539 Query 26188 ATCGTGAG---CATGAATACCGATTCCACCAGC 26217 || || ||| | |||||| |||||||| Sbjct 214540 ---GTTAGATATATGTAGACCGATACCACCAGC 214569 >seq6 Length=1133955 Score = 149 bits (164), Expect = 3e-31 Identities = 231/330 (70%), Gaps = 0/330 (0%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||| |||| ||| ||| ||| |||| ||||| ||||| || ||||| || Sbjct 478994 ATTTGGAGAGAACAAAGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGG 479053 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||||| ||| || ||||| | ||||| || |||||||| |||||||||||| | Sbjct 479054 GATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCT 479113 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | || | ||||||||| ||||||| |||||||||||| ||||| | ||||| ||| Sbjct 479114 AATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACC 479173 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 ||| || |||||||| || ||||| | ||||| | || || || | ||| Sbjct 479174 AGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCAT 479233 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 ||||| || || | ||| ||||| || | | ||| | || ||||| | ||||| Sbjct 479234 TGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAAC 479293 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGC 26217 | || || | |||||| |||||||| Sbjct 479294 GTTATGGATGTGTAAACCGATACCACCAGC 479323 Score = 86.0 bits (94), Expect = 3e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107 ||| |||||| ||||||| |||||||| || | || |||||||||||||| || || || Sbjct 478172 GTTAGAAGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGT 478231 Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167 ||||||| || | | | || ||||||||||| || || ||||| || || | Sbjct 478232 TGGCATTGGAGCAACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTTAAG 478291 Query 25168 TTTATCCCAATC 25179 |||||||||| Sbjct 478292 AGTATCCCAATC 478303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039962992900