Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq6 302 5e-77 seq5 123 3e-23 >seq6 Length=1133955 Score = 302 bits (334), Expect = 5e-77 Identities = 919/1406 (65%), Gaps = 43/1406 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| | || ||||| | ||||| ||||| ||||| || ||| ||| | || || Sbjct 479557 CCACAGCATTTGATCATGAGAGTCGCTATCGGTATCCATGGTAGAGATATTAAATCAGTT 479498 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| || || ||||| | || || |||| ||||| | ||||| | || Sbjct 479497 ATTGAGACTTATAACCTCATGTCTGAGAGATAC-TTCACCCACGCTTCTCCAACTTTGTT 479439 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| ||| || ||||||||| ||| |||||| | || | | || || Sbjct 479438 CAACGCTGGTACCCCACACCCACAGATGTCCTCTTGTTTCCTTGTGGCTATGAGAGAAGA 479379 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || ||| | |||||||||| ||| | | | ||||| ||||| ||| ||||| Sbjct 479378 TTCCATCGAGGGTATCTATGAGACTTTGAAACAATGTGCCTTGATCTCCAAGACCGCTGG 479319 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | ||||||||| | || ||||| | ||| ||| || || || Sbjct 479318 TGGTATCGGTTTACACATCCATAACGTTAGAGCTACAGGCTCTTACATTGCTGGTACTAA 479259 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || | ||| | ||||||||| |||| || |||||| ||| || || || || Sbjct 479258 CGGTACTTCTAACGGTTTGATTCCAATGGTTCGTGTCTTTAACAACACTGCTCGTTACGT 479199 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | || ||| || | || |||||||||||||| Sbjct 479198 CGACCAAGGTGG---TAACAAGAGACCTGGTGCATTTGCCCTTTATTTGGAACCATGGCA 479142 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | |||||| || | | Sbjct 479141 CGCAGATATCTTTGATTTCATCGACATTAGAAAGAATCACGGTAAAGAAGAGA-TCAGAG 479083 Query 75685 -TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | ||| | || || | ||||||| || || | |||||| | || ||||| Sbjct 479082 CTCGTGATTTGTTCCCAGCATTGTGGATCCCTGATTTGTTCATGGAACGTGTTGAATCTA 479023 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 |||| ||||| || | |||| |||| | | ||||||||||| | ||| |||| Sbjct 479022 ATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGACTGTTATGGTG 478963 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | || || | || || || |||||||| | || ||| | | | |||||| | Sbjct 478962 ATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGGTCGTGGTAGAAAGACTGT-C 478904 Query 75864 CAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 || | | | ||| ||| | || || || | | ||||| |||||||| || |||| Sbjct 478903 AAGGCTCAAAAGTTGTGGTATGCAATCCTTGATGCCCAGACTGAGACTGGTACTCCATTC 478844 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||||||||||||||| |||||| |||||| |||||| ||||| ||||| | |||||| Sbjct 478843 ATGCTTTACAAGGATGCCTGTAACGAGAAGACTAACCAGAAGAACTTGGGTATGATCAAG 478784 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || || | || || ||| | || ||| | || || || |||||||| Sbjct 478783 TCTTCTAACTTGTGTTGTGAGATTGTCGAATACTCTGACCCAGAAGAAGTTGCTGTTTGT 478724 Query 76043 AATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA---------------GACT 76087 || ||||| || || || | ||| | ||| |||| | ||| Sbjct 478723 AACTTGGCCTCCATTGCATTGCCA---GCTTTCATTGAAAAATCCCTTGATGGTACCACT 478667 Query 76088 CGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147 | |||| | | | |||| | ||| |||| | ||| |||| || || || | ||| Sbjct 478666 CAGACTTATAACTTTGAACGTTTGCATCAAATTGCCAAGGTTGTCACAAAGAACTTGAAC 478607 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACA 76206 || |||||||| | || | || || || ||| || |||| || |||||| || | Sbjct 478606 AGAATCATTGACCGTAACTACTACCCAGTCCCAGA-AGCTAGAAACTCCAATATGAGAAA 478548 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGC 76266 |||||| |||| | |||||||||||| | || |||| ||||| | | || | | Sbjct 478547 CAGACCAATTGCCCTCGGTGTTCAAGGTTTAGCTGATGCCTTTATGATTTTGCGTTTGCC 478488 Query 76267 ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326 |||||| || || | || ||||| |||| || ||||| || ||||| |||||||| Sbjct 478487 ATTTGAATCTGAAAAGGCTAAGGAATTGAACATTCAGATCTTCGAGACCATTTATCACGC 478428 Query 76327 ATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386 | ||||| | | ||| | || | || ||||| | || || |||| | || Sbjct 478427 TGCTTTGGAGTCCTCTCTTGAGCTCGCCAAGTCCGAAGGTCCATACGAATCATTCCAAGG 478368 Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA- 76445 ||| || || || | || |||||||||||| | |||| | |||| | | | Sbjct 478367 TTCCCCAGCTTCTAAGGGTCAGCTTCAGTTTGACCTTTGGG--GAAGAAAGCCTTCCGAT 478310 Query 76446 -ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | || |||||| ||| |||| || || | ||| | | ||| |||| Sbjct 478309 TTGTGGGATTGGGATACTCTTAAGGCTGATATTGTCAAGTACGGTTTGAGAAAC--TCTT 478252 Query 76505 T--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 76562 | | | || ||||||||||| ||||| || | |||||||||||| | || ||||| | Sbjct 478251 TGCTTGTTGCTCCAATGCCAACTGCCTCGACTTCTCAAATCTTGGGTTACAACGAATGTT 478192 Query 76563 TTGAACCATACACAACAAACATCTAC 76588 | ||||||||||| | ||||| ||| Sbjct 478191 TCGAACCATACACTTCTAACATTTAC 478166 >seq5 Length=1593029 Score = 123 bits (136), Expect = 3e-23 Identities = 203/289 (70%), Gaps = 8/289 (3%) Strand=Plus/Minus Query 64945 TTGATTGACAAATACATTAAGGATGGATCTGAAAAGA---AGCAGTTATTTGAAGCCATC 65001 |||||||||| || || |||||| | || || || | || ||| | ||||| Sbjct 293834 TTGATTGACACTTATATCAAGGATCCAC---AACAGGCTGAGTATTTGTTTAATGCCATT 293778 Query 65002 CAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAA 65060 | ||| | ||||||||| |||||||||| | ||||| ||| |||| ||| | | || Sbjct 293777 GAGACTATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAA 293718 Query 65061 GTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTC 65120 | | || |||| ||| | ||| |||| ||||| ||| || |||||||||||||| Sbjct 293717 GAAGC-CTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTC 293659 Query 65121 CGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTT 65180 || || || | |||||| |||||||||||| | ||| | |||||||| | || Sbjct 293658 TGGTTCCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTT 293599 Query 65181 CTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||| ||||| | |||| ||| ||||| ||| | ||| || |||||| Sbjct 293598 CTCTAATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCC 293550 Score = 118 bits (130), Expect = 1e-21 Identities = 105/129 (81%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 27904 AAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCA 27963 ||||| ||||| | ||| ||||||||||| || || ||||||||| | ||||| | |||| Sbjct 980379 AAGTCCTTGTCACTGTGGTTGAAGAGAACAACCTTCACTTCACCTCTGTAGTCTGCATCA 980320 Query 27964 ATAACACCCGCACCAACTTGA-ATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAAC 28022 | ||||| ||||| |||| ||||| |||||||| || | |||||| ||||| ||||| Sbjct 980319 ACGACACCGGCACCTG-TTGAGATACCGTGCTTCACGGCCAAACCGGAACGTGGAGCAAC 980261 Query 28023 ACGACCATA 28031 ||||||||| Sbjct 980260 ACGACCATA 980252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569510514560