Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq7 138 2e-27
seq1 122 2e-22
seq4 93.3 8e-14
>seq7
Length=431226
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| || |||| || | || | ||| || ||| || ||||| ||
Sbjct 275145 ACCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 275086
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
| |||||| ||| || | || || |||||||| || | |||||| || ||||| ||
Sbjct 275085 AAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGG 275026
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| || || || |||| || | ||| |||||| ||||||||||||||
Sbjct 275025 GATACCTTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAAC 274966
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| | ||| || || ||||| || || || || ||||| || ||||| ||
Sbjct 274965 CTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 274915
>seq1
Length=3147266
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| | |||| || | || | ||| || ||| || ||||||
Sbjct 843473 ATACCACCTCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCG 843414
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | |||||| ||| || | || || |||||||| || | |||||| || |||||
Sbjct 843413 GAGAGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGT 843354
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || || || || || || | || | || |||||||||||| ||||||
Sbjct 843353 GGGATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCA 843294
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || ||||| ||||| || | || || || || ||||||||
Sbjct 843293 ACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244
Score = 116 bits (128), Expect = 7e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 193127 TTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATA 193186
||| | |||||||||||||| | |||| || | || | ||| || ||| || ||
Sbjct 843705 TTAAAAACCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTA 843646
Query 193187 GTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATC 193246
|||||| || |||||| ||| || | || || || ||||| || | |||||| || ||
Sbjct 843645 GTCGGACAAGGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTC 843586
Query 193247 AGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGA 193306
||| || || ||||| || ||||| || || | || | || |||||| || || ||
Sbjct 843585 AGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGA 843526
Query 193307 CTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || ||||| ||||| || | || || ||||| || |||||
Sbjct 843525 TTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472
Score = 113 bits (124), Expect = 8e-20
Identities = 167/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | || | ||| || || ||
Sbjct 843252 AATTTGCATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTT 843193
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|||||||| | ||||| ||| || | || || ||||| || || | |||||| ||
Sbjct 843192 GTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTG 843133
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||||| || || || || || || || || |||| || | || ||| || |||||
Sbjct 843132 GTCAGGTGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGA 843073
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||||| || || || ||||| ||||| || | || || || || ||||||||
Sbjct 843072 AGACTCAACCTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016
Score = 107 bits (118), Expect = 3e-18
Identities = 149/207 (72%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| || | || | ||| || ||| ||
Sbjct 843024 AATTTGCATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTT 842965
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|||||||| | |||||| ||| || | || || |||||||| || | |||||| ||
Sbjct 842964 GTAGTCGGAAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTG 842905
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|||||| || || || || || || || || |||| || | || |||||| |||||
Sbjct 842904 ATCAGGCGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGA 842845
Query 193304 AGACTCAACTTCTAGA--GTTATAGTT 193328
|||||||| ||||| ||||| |||
Sbjct 842844 GGACTCAAC--CTAGAATGTTATTGTT 842820
>seq4
Length=1873953
Score = 93.3 bits (102), Expect = 8e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| || |||| |||||| || | ||| || || || |||||
Sbjct 1428443 ATACCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCA 1428384
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | |||||| || || | || || ||||| || || | |||||| || |||||
Sbjct 1428383 GAAAGGGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGT 1428324
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || || || || || |||| || | || ||| || || || ||||||
Sbjct 1428323 GGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCA 1428264
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336
|| || | || || || ||||| ||
Sbjct 1428263 ACCTCCAAGGTAATGGTCTTACCGGT 1428238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654265051840
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