Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq5 167 3e-36 seq1 123 4e-23 seq7 89.7 8e-13 >seq5 Length=1593029 Score = 167 bits (184), Expect = 3e-36 Identities = 371/555 (67%), Gaps = 11/555 (2%) Strand=Plus/Plus Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211 || ||||| ||||| |||||||| ||||||||||| | | | || || || ||| || Sbjct 293542 AACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAA 293601 Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271 || || || ||||| | |||||| || || | ||| || || || || || || ||| Sbjct 293602 GTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAG 293661 Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTG 18331 ||||| ||||| ||||| || || || | | ||| ||| | || | || || Sbjct 293662 AAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTC-TTC 293720 Query 18332 CTCAGTA-TCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390 || | | ||||| | ||||| || | | ||||| || ||| |||| || Sbjct 293721 ATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAAT 293780 Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 ||||||||||||| || | || | ||| || ||||||||||| || || | ||| Sbjct 293781 GGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCAAGAGAGA 293840 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 || | ||||| || ||| | ||||| || || |||| || || | |||| || Sbjct 293841 GTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTC 293900 Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 ||| ||| | |||| | | || | || ||||| ||||||||||| |||||||||| Sbjct 293901 TGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGA 293960 Query 18571 AGATGCGAAAAATGCCAAAAC---ATATTTAATGAAATGTTTTTCATTATCCTTGA---G 18624 || || || || || | ||| | | | | |||| | |||||| || || | Sbjct 293961 AGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACG---TTCATTCTCATTCAATCT 294017 Query 18625 ATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGA 18684 |||||||| |||| | ||| || || | ||||| || || | ||||| ||||| | Sbjct 294018 GTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAAGC 294077 Query 18685 TTCGGCCTGTTTGTA 18699 ||| |||| ||||| Sbjct 294078 TTCAGCCTTCTTGTA 294092 >seq1 Length=3147266 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| || ||||||||| | || || ||| ||| Sbjct 843472 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 843531 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||||| || ||| || ||||| || ||||| || || || || || Sbjct 843532 GACACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 843591 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | || | ||| ||||||||||| || ||| ||||| || || || || || Sbjct 843592 CAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAAC 843651 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| | || ||||| || ||||| ||||| ||||| ||| Sbjct 843652 ATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 843699 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || |||||||| || ||||||||| | || || || || Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| || ||| || || || || || || || || || || || Sbjct 843304 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 843363 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | || | ||||||||||||||| |||||| ||||| | || || || || Sbjct 843364 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 843423 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| | || ||||| || || || ||||| ||||| ||| Sbjct 843424 ATTCAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGAGGTGGT 843471 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || ||||| || || ||||||||| | || || || ||| Sbjct 843016 ATGCAAATTTTCGTGAAGACCTTGACCGGTAAGACTATTACACTTGAGGTTGAGTCTTCC 843075 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || || || || || || || || || || || || || Sbjct 843076 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAG 843135 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | || | ||||||||||||||||||||| |||||| | || || || || Sbjct 843136 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 843195 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| | || ||||| || || || ||||| ||||| ||| Sbjct 843196 ATCCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 843243 >seq7 Length=431226 Score = 89.7 bits (98), Expect = 8e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| || ||| |||| || | || || || || || || || || || || | Sbjct 274915 AAGATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCT 274974 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | |||| || || || || || || || |||||||| || || || || Sbjct 274975 TCCGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGAC 275034 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || || ||| | || | ||||||||||||||| || ||| ||||| | || || || Sbjct 275035 CAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTAC 275094 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || || ||| | || ||||| || ||| | ||||| ||||| |||| Sbjct 275095 AACATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTG 275146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871890219200