Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 114 2e-20 seq7 89.7 9e-13 >seq1 Length=3147266 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171839 AATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898 || ||||||||| | || || || || || | ||| | ||| || ||| || || || Sbjct 843702 AAAACCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTC 843643 Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 || || | || | || || | || ||||||||||| || | |||||| |||||||| Sbjct 843642 GGACAAGGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGG 843583 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 ||| || ||||| || ||||| || ||| || || || ||||| || || ||||| Sbjct 843582 TGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTC 843523 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||| || |||||||| || || || | || |||||||| Sbjct 843522 AACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || || || | || | ||| || ||| || || || Sbjct 843473 ATACCACCTCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCG 843414 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || | || ||||| ||||| || | |||||| ||||||||| Sbjct 843413 GAGAGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGT 843354 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || || || || ||| || || || |||||||| || || || Sbjct 843353 GGGATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCA 843294 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||| || |||||||| || || || | ||| || ||||| Sbjct 843293 ACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244 >seq7 Length=431226 Score = 89.7 bits (98), Expect = 9e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || ||||| ||||| || | |||||| ||||||||||| || |||||||| || || || Sbjct 275063 TGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTGGATC 275004 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || ||||| ||||| || || || || || || | ||| ||||| ||||| Sbjct 275003 TTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCTTACCC 274944 Query 172044 GTTAATGTTTTAATGAATATCTGCATTTT 172072 || | || |||| || |||||||| || Sbjct 274943 GTGAGGGTCTTAACAAAGATCTGCATCTT 274915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135864229600