Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 181 3e-40 seq6 134 4e-26 seq2 129 2e-24 seq4 98.7 3e-15 >seq5 Length=1593029 Score = 181 bits (200), Expect = 3e-40 Identities = 530/803 (66%), Gaps = 19/803 (2%) Strand=Plus/Plus Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACA 155639 |||| ||| ||| |||| ||||| || |||||||| || || | || |||| || Sbjct 213949 AAGAGCAACAGAGGCCAAGTTACAAACGGCAGTCTC-TTCAGGT-GATGAGTATTGAACC 214006 Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 | ||||| |||| ||| || |||||| || || ||||||||||| ||| || || Sbjct 214007 ACTTCACAACACAAGTTCGAGGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTA 214066 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 |||||||||||||| || || ||| | || || || || | || | |||| || Sbjct 214067 TTACAAGCATCCTTATAGAGCATGAAAGGACCACCAGTTTCAACTTGAGACTCCAAGATT 214126 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 |||| | | | || ||||| | ||| || |||||| ||||||||| Sbjct 214127 GAGTGCCATAACTTCTGAGCCTTAATCTTCTTCTTTGCCAATCCTTCCTTCTCATATTTG 214186 Query 155820 ATATACAGCGTTCGGTAATCC-TCACCGTAACAATCACTCAGTCCAGG-GCACTTATCGG 155877 |||||| | ||| | ||||| || ||| ||| ||||| ||| | ||| | Sbjct 214187 TGATACAGT-TGAACAAATGCATCACCATACATCTCATTCAAACCAGGAGCA-TCATCTG 214244 Query 155878 GGCAAAACAGCGACCAAATTTTAT--TACCGATTACACGCTCCATAAATACATCACTCGC 155935 | | ||||| |||| || || | | | || ||||| |||| ||| Sbjct 214245 GACTAAACAAGCACCATTCTTCATCTTTCTCA--ACTTTTTCCATGAATAGATCTGGGAT 214302 Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAG 155995 ||| | ||||||||| | || | || | ||| || | || |||||||||| || Sbjct 214303 CCATAGAGCATAGAACAAATCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAA 214362 Query 155996 CTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATT 156055 | |||||| ||| | ||||| ||| ||| |||| ||| || ||||| ||| Sbjct 214363 GTTTAAGAAATCCATCACATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGG 214422 Query 156056 CCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGG 156112 ||||| ||||| ||||| ||||| | ||||| ||||| || || | |||||||| Sbjct 214423 TCTCTTATTACCACCTTGATCAACATATCTTGCAGTGTTATTAAACACTCTAAGCATAGG 214482 Query 156113 AATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATT 156172 | ||||| || ||||| ||||| | |||| ||| | | ||||| || | || || Sbjct 214483 TACGATACCGTTTGAAGTACCATTTGATCCGGCAATGTATGCACCAGTGGATCTAATGTT 214542 Query 156173 ATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACA-- 156230 | |||||||| || |||||||| | || || ||| |||| | || | | || Sbjct 214543 AGATATATGTAGACCGATACCACCAGCAGCCTTCGAGATTAGAGC--AGTCTTGTGCAAA 214600 Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAAT 156290 || || | || || || || || |||||||| ||| ||||| | || || | Sbjct 214601 GTCTTATATATGCCATCGATGGAGTCATCTTCTATTCCAAGTAGGAAACAGGATGAGAGA 214660 Query 156291 TGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350 | || |||||| |||| |||||||||||| |||| |||||| || | |||||| | Sbjct 214661 TATGGAGTTGGTGTACCAGAGTTGAATAGTGTTGGTGATGCATGGATGAGATACTTTTGT 214720 Query 156351 GACATATAATCGTATGTCTCCTT 156373 ||||| ||| || |||||||| Sbjct 214721 GACATGAGATCATAAGTCTCCTT 214743 >seq6 Length=1133955 Score = 134 bits (148), Expect = 4e-26 Identities = 553/862 (64%), Gaps = 15/862 (2%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCG-TCGCTGTATTCTACAATCTCA 155645 |||| || |||| ||||| || ||| || ||| | | || |||||| ||||||||| Sbjct 478708 CAATGGAGGCCAAGTTACAAACAGCAA-CTTCTTCTGGGTCAGAGTATTCGACAATCTCA 478766 Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705 || |||| ||||||| |||||| | || || ||||||||||||| || |||||| Sbjct 478767 CAACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAG 478826 Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGC 155765 ||||||||||| || ||| |||| || || ||||| |||| || || || || | Sbjct 478827 GCATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATAC 478886 Query 155766 CAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TTTCATAT 155823 || | | | || || | ||| | | ||||| |||||| | ||||| Sbjct 478887 CACAACTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAA 478946 Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAA 155883 | ||| || | | || ||||| ||||| ||| || || || | || || | | Sbjct 478947 AGAGCCTT--GAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGA 479004 Query 155884 ACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCCCAAAT 155941 ||| | ||| |||| |||| ||||| ||||| || | |||| ||| | Sbjct 479005 ACAAAGTCCATTCACCATTA--GATTCAACACGTTCCATGAACAAATCAGGGATCCACAA 479062 Query 155942 AGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGTGATTCTTCCGTAGCTCTA 156000 || ||| | || | | || ||| ||| || | ||||||||||| | | || | Sbjct 479063 TGCTGGGAACAAATCACGAG-CTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGA 479121 Query 156001 AGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCT 156060 ||| || ||||| | || ||| |||| ||| | ||||| |||| |||| Sbjct 479122 TGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCT 479181 Query 156061 TG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAA 156117 || ||||| || || || || |||||||| || || ||||||| | ||| ||||| | Sbjct 479182 TGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCA 479241 Query 156118 TACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAA 156177 ||| || ||||| || || || || ||| | || || | | | ||| ||||| | Sbjct 479242 AACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGA 479301 Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237 | |||| || |||||||| | || || || || |||| || | ||| | Sbjct 479302 TGTGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCAT 479361 Query 156238 AAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTC 156297 | ||||| || || ||||| ||| ||| | | || | || || | || || Sbjct 479362 AGATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGT 479421 Query 156298 GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATAT 156357 |||| || ||||||||||| | || || | || || | || || | | |||||| Sbjct 479422 GTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGA 479481 Query 156358 AATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCA 156417 | || ||||| ||| | || || || || |||| ||||| ||| |||| Sbjct 479482 GGTTATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCA 479541 Query 156418 TCCACATATGCTGAGGACGCTC 156439 | || |||||| ||||| || Sbjct 479542 TGATCAAATGCTGTGGACGTTC 479563 >seq2 Length=2138410 Score = 129 bits (142), Expect = 2e-24 Identities = 266/390 (68%), Gaps = 8/390 (2%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 |||| || || || |||||| |||||||||| || | | ||||| ||| Sbjct 143929 TCAAGACCATCCTCACCGTAGATGAACTGAATGATGTTACCCAAGGAGTTTCTGGTGGTA 143870 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 ||| ||| || ||| || ||||||| ||||| | |||||| |||||||||||| Sbjct 143869 CCATCGTAATGAACCATGATATCTTCCAATGCCTTGACAAGACGACGTTGAATATAACCA 143810 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 || | || || || || |||||||| | ||| |||||||||||||||| |||||| Sbjct 143809 GTCTCGGCAGTCTTGACGGCGGTATCAATCAAACCCTCACGACCACCCATAGCGTGGAAG 143750 Query 302671 AATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCT 302728 | | ||||| ||| || | || | ||| ||||| |||| |||||||| | || Sbjct 143749 TAGAACTCTTGTGGT-GTCAAACCTCTCAA-GTAGGAGTTCTCGACGAAACCCTTAGACT 143692 Query 302729 CGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788 | || || | || ||||| || ||||||| || | | | |||| ||| | Sbjct 143691 CAGGAGAGTAATCATCCTTGGAGAAATGTGGCAAAGTACGATCAGCGAAGCCAAATGCAA 143632 Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAAT 302848 ||||||| || |||||| |||||| || | || | | |||||| | ||| || ||| Sbjct 143631 TACGCTTACCCTCAACGGACTGCTGACCAACACAGGCAGACATCTGGGCAATGTT--AAT 143574 Query 302849 CACTG--CCCTTGGAGCCAGCATTTACCAT 302876 | | |||||||| |||||| | ||||| Sbjct 143573 GAAAGAACCCTTGGAACCAGCACTGACCAT 143544 Score = 109 bits (120), Expect = 2e-18 Identities = 109/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || |||||||| | ||| ||||||||| || || || |||||| ||||||||||| Sbjct 144623 CAAAATTTCTTTCAAACGTGGAACACCAGAAGTAACCTT---CTTGGAAGCAACACCAGC 144567 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 || ||||||||||||| || | || |||| ||||||||||||| || || |||| Sbjct 144566 GAAATGGAAAGTATTCAACGTCATCTGTGTAGCTGGCTCACCAATAGACTGGGCAGCAAC 144507 Query 301932 CATACCAACCATTTCTCCTGG 301952 || ||||||||| || ||||| Sbjct 144506 CACACCAACCATCTCACCTGG 144486 Score = 102 bits (112), Expect = 2e-16 Identities = 223/332 (67%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 289020 CCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCT 289079 ||| | |||||||| ||||||||||| |||| || || | | |||| || ||| Sbjct 1435603 CCTCTCTTTACCAATGGCATCAATTTCATCAACAAAGATGATAGCTGGAGCCATTGTTCT 1435544 Query 289080 CGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAA 289139 ||| || || || || | || | ||| || |||| ||| ||| |||| || ||||| Sbjct 1435543 AGCAGTTTTGAACAAATCACGAACTCTGGAGGCACCAACACCGACAAACATCTCGACAAA 1435484 Query 289140 TTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAG 289199 || ||| | || ||| || ||| | ||| || || || || ||| | || || Sbjct 1435483 CTCTGAACCAGACACTGAAAGGAAAGGAACACCAGCCTCACCGGCGGTAGCCTTAGCAAG 1435424 Query 289200 AAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC 289259 ||| ||||||||||| || || || || || | | || || | ||||| || Sbjct 1435423 AAGGGTCTTACCTGTACCTGGGGGACCAGACAAGATGGCACCACGAGGAATCTTTGCACC 1435364 Query 289260 AGCAGACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATAT 289317 | || || |||||||| ||| |||| ||||| || |||| |||| | ||| | Sbjct 1435363 A--AGTTTTTCATATTTCTGTGGGTTCTTCAAAAACTCAACAAATTCCATGATTTCCTCC 1435306 Query 289318 TTTGCCTCATCACATCCTGCTACATCAGCAAA 289349 || || |||||||| || || ||||| ||||| Sbjct 1435305 TTAGCTTCATCACAACCGGCAACATCGGCAAA 1435274 >seq4 Length=1873953 Score = 98.7 bits (108), Expect = 3e-15 Identities = 194/285 (68%), Gaps = 4/285 (1%) Strand=Plus/Plus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| | ||| || ||| | ||||||||||| || | | |||| |||| || Sbjct 836493 ACAAATATGCACTCTGAAGGCATCAGATGCCTCCATCAATCTCTCCTTCATGAACGAAGC 836552 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 |||||||| | ||||||||||||||||||||||||||||||||| | ||||||||| | Sbjct 836553 AGCACCGTGAGCAATCATACAATCACGCTCCATTTCACCGAAACGCAAACCACCATCTCT 836612 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 | | |||||| | ||||| | || || | || ||||| | | | | ||| Sbjct 836613 TGAACGACCCTCCACTGGCTGTCTCGTAAGGATTTGCACCGGACCTCTAGCTCTGGCATG 836672 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TG 251661 ||| |||| |||||||| | | ||| |||||| | | ||||| | ||| | || Sbjct 836673 AATCTTGTCATCAACCATATGTCTCAAACGTTGGTAGTAAGTAGGACCAAAGAACACTTG 836732 Query 251662 CTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCG 251706 | | ||| | || ||||| || |||| ||||| || ||| Sbjct 836733 GGCCA--TCATCTTCTTACCAGTGTGACCGTTGTACATCACCTCG 836775 Score = 95.1 bits (104), Expect = 4e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331 ||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||| | Sbjct 836553 AGCACCGTGAGCAATCATACAATCACGCTCCATTTCACCGAAACGCAAACCACCATCTCT 836612 Query 233332 TGACCTACCCTGGACTG 233348 ||| | ||||| |||| Sbjct 836613 TGAACGACCCTCCACTG 836629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817373708044