Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 seq7 129 5e-25 seq6 98.7 9e-16 seq5 86.0 6e-12 >seq1 Length=3147266 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || ||||| |||||||| ||||| || ||| || | Sbjct 843472 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 843531 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||||| |||||||| ||||| || || || || || Sbjct 843532 GACACTATTGACAACGTTAAGTC-TAAGATTCAAGACAAGGAAGGTATTCCACCTGACCA 843590 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||||||| || || ||||| |||||| |||| | |||| || || || Sbjct 843591 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAA 843650 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| ||||| || || || |||||||||||| ||||| | || || Sbjct 843651 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 843698 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || | || ||||| |||||||| ||||| || || || || Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | || |||||| ||||| || || || || || || || Sbjct 843304 GATACTATTGACAACGTTAAGTCTAA-GATCCAGGACAAGGAGGGTATCCCACCTGACCA 843362 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | ||||||||||| || ||||| || ||| |||| | | || || || || Sbjct 843363 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAA 843422 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| ||||| || || || |||||||| ||| ||||| | || || Sbjct 843423 CATTCAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 843470 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || || || || || ||||| || | | ||||||||||| || Sbjct 842872 AAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAG 842931 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||| |||| | | || || || |||||||| ||||| || || || ||| Sbjct 842932 CAGCTTGAGGATGGTAGAACCCTTTCCGACTACAACATTCAGAAGGAGTCCACTCTTCAC 842991 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||| ||||| | || || Sbjct 842992 TTGGTCTTGAGATTGAGAGGTGG 843014 >seq7 Length=431226 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| |||| || || || ||||| || || || | || || || | | Sbjct 274917 GATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTC 274976 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||||||||| || || || || || Sbjct 274977 CGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCA 275036 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | ||||||||||| || ||||| |||||| |||| | | || || || || Sbjct 275037 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAA 275096 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 |||||| ||||| || || || ||||||||| | ||||| | || || || Sbjct 275097 CATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTGG 275147 >seq6 Length=1133955 Score = 98.7 bits (108), Expect = 9e-16 Identities = 364/565 (64%), Gaps = 23/565 (4%) Strand=Plus/Plus Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139 ||| ||||| | ||| || || || ||||| || ||||| |||||||||||| || Sbjct 478709 AATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACA 478768 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199 |||||| ||| | |||||||| |||| || || | || || | || |||||| || Sbjct 478769 ACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGC 478828 Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAA 139259 ||| ||||||||||| | || || ||||| || || | || | || | | Sbjct 478829 ATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCA 478888 Query 139260 CAA-----GTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCG 139314 ||| | ||| | || ||| |||| | ||| | ||| ||||| || Sbjct 478889 CAACTTTTGAGCCTTGACAGTCTTTCTACCACG--ACCTTCTT---TCTCATACTTCTCA 478943 Query 139315 TAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATC----GCGACACTTGTCAGG 139370 || || | | |||| ||||| || ||||| |||| | || || || || Sbjct 478944 TAAAGAGCCTTGAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATTT----GG 478999 Query 139371 ACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCA 139430 | | | | | |||| | || || | | || || |||||||| ||| || ||||| Sbjct 479000 AGAGAACAAAGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCA 479059 Query 139431 CAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTT-TCATGT 139489 ||| || | |||||| || || | | ||||| | || || | | || | |||| Sbjct 479060 CAATGCTGGGAACAAATCACGAGCTCTGATCTCTTCTTTA-CCGTGATTCTTTCTAATGT 479118 Query 139490 TAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TT 139546 | ||||||||| | || |||||||||||||||| ||| | ||| | ||| || | Sbjct 479119 CGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTC 479178 Query 139547 TCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCT 139606 || || |||||||| ||||||| || ||| || || || || || | ||| || Sbjct 479179 TCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAA 479238 Query 139607 CCAGACCGCTCGCTGTTCCGTTGGT 139631 || |||| | | || ||||| || Sbjct 479239 TCAAACCGTTAGAAGTACCGTTAGT 479263 >seq5 Length=1593029 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/187 (71%), Gaps = 5/187 (3%) Strand=Plus/Plus Query 139410 CATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGA 139469 |||||| ||||| || ||||| | ||| | | |||||| || || || | |||||| Sbjct 214285 CATGAATAGATCTGGGATCCATAGAGCATAGAACAAATCACGAGCTCTCATCTCTTCCTT 214344 Query 139470 ACCCATGTTACGTT-TCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGAT 139528 || ||| | | | | | ||| | |||||| | || ||||| ||||||||||||| || Sbjct 214345 TCC-ATGATTCTTCCTTAAGTTTAAGAAATCCATCACATCAGCATGCCATGGTTCCAAAT 214403 Query 139529 AGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTAT 139585 ||||||| | ||| || | || || ||||||||||| || | || | ||| |||| Sbjct 214404 AGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAACATATCTTGCAGTGTTAT 214463 Query 139586 TGAATAC 139592 | || || Sbjct 214464 TAAACAC 214470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897532515360