Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 2e-30
seq7 129 5e-25
seq6 98.7 9e-16
seq5 86.0 6e-12
>seq1
Length=3147266
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || ||||| |||||||| ||||| || ||| || |
Sbjct 843472 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 843531
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | ||||| |||||||| ||||| || || || || ||
Sbjct 843532 GACACTATTGACAACGTTAAGTC-TAAGATTCAAGACAAGGAAGGTATTCCACCTGACCA 843590
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || || ||||| |||||| |||| | |||| || || ||
Sbjct 843591 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAA 843650
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| || || || |||||||||||| ||||| | || ||
Sbjct 843651 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 843698
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || | || ||||| |||||||| ||||| || || || ||
Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| ||| | || |||||| ||||| || || || || || || ||
Sbjct 843304 GATACTATTGACAACGTTAAGTCTAA-GATCCAGGACAAGGAGGGTATCCCACCTGACCA 843362
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||||||||| || ||||| || ||| |||| | | || || || ||
Sbjct 843363 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAA 843422
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| || || || |||||||| ||| ||||| | || ||
Sbjct 843423 CATTCAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 843470
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| || ||||| || || || || || ||||| || | | ||||||||||| ||
Sbjct 842872 AAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAG 842931
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||| |||| | | || || || |||||||| ||||| || || || |||
Sbjct 842932 CAGCTTGAGGATGGTAGAACCCTTTCCGACTACAACATTCAGAAGGAGTCCACTCTTCAC 842991
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||| ||||| | || ||
Sbjct 842992 TTGGTCTTGAGATTGAGAGGTGG 843014
>seq7
Length=431226
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || || ||||| || || || | || || || | |
Sbjct 274917 GATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTC 274976
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||||||||| || || || || ||
Sbjct 274977 CGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCA 275036
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||||||||| || ||||| |||||| |||| | | || || || ||
Sbjct 275037 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAA 275096
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|||||| ||||| || || || ||||||||| | ||||| | || || ||
Sbjct 275097 CATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTGG 275147
>seq6
Length=1133955
Score = 98.7 bits (108), Expect = 9e-16
Identities = 364/565 (64%), Gaps = 23/565 (4%)
Strand=Plus/Plus
Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139
||| ||||| | ||| || || || ||||| || ||||| |||||||||||| ||
Sbjct 478709 AATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACA 478768
Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199
|||||| ||| | |||||||| |||| || || | || || | || |||||| ||
Sbjct 478769 ACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGC 478828
Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAA 139259
||| ||||||||||| | || || ||||| || || | || | || | |
Sbjct 478829 ATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCA 478888
Query 139260 CAA-----GTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCG 139314
||| | ||| | || ||| |||| | ||| | ||| ||||| ||
Sbjct 478889 CAACTTTTGAGCCTTGACAGTCTTTCTACCACG--ACCTTCTT---TCTCATACTTCTCA 478943
Query 139315 TAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATC----GCGACACTTGTCAGG 139370
|| || | | |||| ||||| || ||||| |||| | || || || ||
Sbjct 478944 TAAAGAGCCTTGAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATTT----GG 478999
Query 139371 ACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCA 139430
| | | | | |||| | || || | | || || |||||||| ||| || |||||
Sbjct 479000 AGAGAACAAAGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCA 479059
Query 139431 CAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTT-TCATGT 139489
||| || | |||||| || || | | ||||| | || || | | || | ||||
Sbjct 479060 CAATGCTGGGAACAAATCACGAGCTCTGATCTCTTCTTTA-CCGTGATTCTTTCTAATGT 479118
Query 139490 TAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TT 139546
| ||||||||| | || |||||||||||||||| ||| | ||| | ||| || |
Sbjct 479119 CGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTC 479178
Query 139547 TCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCT 139606
|| || |||||||| ||||||| || ||| || || || || || | ||| ||
Sbjct 479179 TCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAA 479238
Query 139607 CCAGACCGCTCGCTGTTCCGTTGGT 139631
|| |||| | | || ||||| ||
Sbjct 479239 TCAAACCGTTAGAAGTACCGTTAGT 479263
>seq5
Length=1593029
Score = 86.0 bits (94), Expect = 6e-12
Identities = 133/187 (71%), Gaps = 5/187 (3%)
Strand=Plus/Plus
Query 139410 CATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGA 139469
|||||| ||||| || ||||| | ||| | | |||||| || || || | ||||||
Sbjct 214285 CATGAATAGATCTGGGATCCATAGAGCATAGAACAAATCACGAGCTCTCATCTCTTCCTT 214344
Query 139470 ACCCATGTTACGTT-TCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGAT 139528
|| ||| | | | | | ||| | |||||| | || ||||| ||||||||||||| ||
Sbjct 214345 TCC-ATGATTCTTCCTTAAGTTTAAGAAATCCATCACATCAGCATGCCATGGTTCCAAAT 214403
Query 139529 AGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTAT 139585
||||||| | ||| || | || || ||||||||||| || | || | ||| ||||
Sbjct 214404 AGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAACATATCTTGCAGTGTTAT 214463
Query 139586 TGAATAC 139592
| || ||
Sbjct 214464 TAAACAC 214470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897532515360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |