Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-19
seq5 107 1e-17
seq4 95.1 9e-14
>seq1
Length=3147266
Score = 114 bits (126), Expect = 1e-19
Identities = 193/279 (69%), Gaps = 3/279 (1%)
Strand=Plus/Plus
Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252
||| || || ||||| ||||| | ||||| || || || || || | ||| | ||
Sbjct 2756301 ATCGAAGTCCTCACCACCCAAGTGAGTATCACCGGAAGTGGCCAAAACCTCGAAGACACC 2756360
Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312
| ||||| |||||| || | |||||| ||| |||||||||| || | | || |
Sbjct 2756361 AGATTCAATAGACAAGAGGGAAACATCGAAGGTACCACCACCCAAGTCGTAGACAATGA- 2756419
Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372
|| | || ||| || || | ||| || || | ||||||||||||||||||
Sbjct 2756420 --TCTGGTGTTCACCTTCACCCTTGTCCATACCGTAGGCGATAGCAGCAGCAGTTGGTTC 2756477
Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432
|| | ||||| | ||| || | ||||||||| | || ||||| ||||| || ||| |
Sbjct 2756478 GTTGACGATTCTGAGAACGTTCAAACCAGCAATGGTACCGGCATCCTTAGTAGCCTGTTT 2756537
Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471
|| | |||||| || || || |||||||| | ||||||
Sbjct 2756538 CTGAGCATCGTTGAAGTAAGCTGGAACAGTGACAACGGC 2756576
>seq5
Length=1593029
Score = 107 bits (118), Expect = 1e-17
Identities = 227/337 (67%), Gaps = 4/337 (1%)
Strand=Plus/Minus
Query 400259 ATAATGCTCACAAAGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGG 400318
|| |||| ||| ||||| || |||||||| ||||||||||| | || ||||||||||
Sbjct 650692 ATGATGCCAACATGGCAGGTACTAAAGAAGGTTATAAATGTACTTTGATCTTGACAGAGG 650633
Query 400319 GAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATG 400378
| ||||| || |||| || | | || || ||| | |||||||| || ||||
Sbjct 650632 GTGATTCCGCCTTGGCATTGGCCGTTGCAGGTCTAGCAGTTGTCGGAAGAGACTACTATG 650573
Query 400379 GAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTG 400438
| |||||| | | || |||| ||||||||||| || ||| || || ||||
Sbjct 650572 GTTGTTTCCCGTTGCGTGGTAAACCATTGAATGTTAGAGAGGCTTCTCATACCCAAATCT 650513
Query 400439 CCGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGA--ACAAGGAAAAGT 400496
|| |||||| ||| || | || | || | || |||| | | ||||| | |||
Sbjct 650512 CCAATAATGCGGAGATCAATGCCTTGAAGCAGATCATTGGTTTGCAACACAAGAAGAAG- 650454
Query 400497 TTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGT 400556
|| || || ||| ||| ||||||| |||| ||| | | | ||||| |||
Sbjct 650453 -TACGAGGACACCAAGTCTTTGAGATATGGCCGTATCATGCTCATGACAGATCAGGATAC 650395
Query 400557 TGATGGGTACCATATCAAAGGATTAATCATGAATTTT 400593
||||| | ||||||||| || ||| | || || |||
Sbjct 650394 CGATGGTTCCCATATCAAGGGTTTATTGATCAACTTT 650358
>seq4
Length=1873953
Score = 95.1 bits (104), Expect = 9e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
|| || | |||||| || ||||| ||||||||||| || |||| | | |||||| ||
Sbjct 1629678 TTCTCCAAACCATAAGCCAAAGCGGCAGCAGTTGGCTCGTTAACGACACGCAAAACGTTC 1629619
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
| ||| |||| || ||||| ||||| || ||||| || |||||||| || || ||
Sbjct 1629618 AAACCGACAATCTGACCGGCATCCTTAGTAGCCTGTCTCTGAGAATCGTTGAAGTAAGCT 1629559
Query 282455 GGAACAGTAATAACGGC 282471
|| ||||||| ||||||
Sbjct 1629558 GGGACAGTAACAACGGC 1629542
Score = 87.8 bits (96), Expect = 1e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175
|||||||| |||| ||| || |||||||| || || || || |||||| | |||||
Sbjct 1420244 AAACCGTAGGCAATAGCAGCGGCAGTTGGCTCGTTGATGATACGAAGAACGTTCAAACCA 1420303
Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235
||||| | | | ||| ||||||||||||||||| ||| || || || ||||| |||
Sbjct 1420304 GCAATGAGACCGGCATCCTTAGTTGCTTGTCTCTGTGAGTCGTTGAAGTAAGCTGGAACA 1420363
Query 86236 GTAATAACTGC 86246
|| || || ||
Sbjct 1420364 GTGATGACAGC 1420374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740629810850712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |