Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-19 seq5 107 1e-17 seq4 95.1 9e-14 >seq1 Length=3147266 Score = 114 bits (126), Expect = 1e-19 Identities = 193/279 (69%), Gaps = 3/279 (1%) Strand=Plus/Plus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| || || ||||| ||||| | ||||| || || || || || | ||| | || Sbjct 2756301 ATCGAAGTCCTCACCACCCAAGTGAGTATCACCGGAAGTGGCCAAAACCTCGAAGACACC 2756360 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 | ||||| |||||| || | |||||| ||| |||||||||| || | | || | Sbjct 2756361 AGATTCAATAGACAAGAGGGAAACATCGAAGGTACCACCACCCAAGTCGTAGACAATGA- 2756419 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || | || ||| || || | ||| || || | |||||||||||||||||| Sbjct 2756420 --TCTGGTGTTCACCTTCACCCTTGTCCATACCGTAGGCGATAGCAGCAGCAGTTGGTTC 2756477 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 || | ||||| | ||| || | ||||||||| | || ||||| ||||| || ||| | Sbjct 2756478 GTTGACGATTCTGAGAACGTTCAAACCAGCAATGGTACCGGCATCCTTAGTAGCCTGTTT 2756537 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 || | |||||| || || || |||||||| | |||||| Sbjct 2756538 CTGAGCATCGTTGAAGTAAGCTGGAACAGTGACAACGGC 2756576 >seq5 Length=1593029 Score = 107 bits (118), Expect = 1e-17 Identities = 227/337 (67%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 400259 ATAATGCTCACAAAGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGG 400318 || |||| ||| ||||| || |||||||| ||||||||||| | || |||||||||| Sbjct 650692 ATGATGCCAACATGGCAGGTACTAAAGAAGGTTATAAATGTACTTTGATCTTGACAGAGG 650633 Query 400319 GAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATG 400378 | ||||| || |||| || | | || || ||| | |||||||| || |||| Sbjct 650632 GTGATTCCGCCTTGGCATTGGCCGTTGCAGGTCTAGCAGTTGTCGGAAGAGACTACTATG 650573 Query 400379 GAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTG 400438 | |||||| | | || |||| ||||||||||| || ||| || || |||| Sbjct 650572 GTTGTTTCCCGTTGCGTGGTAAACCATTGAATGTTAGAGAGGCTTCTCATACCCAAATCT 650513 Query 400439 CCGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGA--ACAAGGAAAAGT 400496 || |||||| ||| || | || | || | || |||| | | ||||| | ||| Sbjct 650512 CCAATAATGCGGAGATCAATGCCTTGAAGCAGATCATTGGTTTGCAACACAAGAAGAAG- 650454 Query 400497 TTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGT 400556 || || || ||| ||| ||||||| |||| ||| | | | ||||| ||| Sbjct 650453 -TACGAGGACACCAAGTCTTTGAGATATGGCCGTATCATGCTCATGACAGATCAGGATAC 650395 Query 400557 TGATGGGTACCATATCAAAGGATTAATCATGAATTTT 400593 ||||| | ||||||||| || ||| | || || ||| Sbjct 650394 CGATGGTTCCCATATCAAGGGTTTATTGATCAACTTT 650358 >seq4 Length=1873953 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || || | |||||| || ||||| ||||||||||| || |||| | | |||||| || Sbjct 1629678 TTCTCCAAACCATAAGCCAAAGCGGCAGCAGTTGGCTCGTTAACGACACGCAAAACGTTC 1629619 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | ||| |||| || ||||| ||||| || ||||| || |||||||| || || || Sbjct 1629618 AAACCGACAATCTGACCGGCATCCTTAGTAGCCTGTCTCTGAGAATCGTTGAAGTAAGCT 1629559 Query 282455 GGAACAGTAATAACGGC 282471 || ||||||| |||||| Sbjct 1629558 GGGACAGTAACAACGGC 1629542 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 |||||||| |||| ||| || |||||||| || || || || |||||| | ||||| Sbjct 1420244 AAACCGTAGGCAATAGCAGCGGCAGTTGGCTCGTTGATGATACGAAGAACGTTCAAACCA 1420303 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 ||||| | | | ||| ||||||||||||||||| ||| || || || ||||| ||| Sbjct 1420304 GCAATGAGACCGGCATCCTTAGTTGCTTGTCTCTGTGAGTCGTTGAAGTAAGCTGGAACA 1420363 Query 86236 GTAATAACTGC 86246 || || || || Sbjct 1420364 GTGATGACAGC 1420374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629810850712