Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 102 8e-17 seq1 89.7 5e-13 >seq4 Length=1873953 Score = 102 bits (112), Expect = 8e-17 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||||| ||||| || ||||| || | || |||||||||| Sbjct 1428419 AAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCCTCGAGC 1428360 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || || | ||||||||| || ||||| || |||||||| |||| Sbjct 1428359 TGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATC 1428300 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| ||||| | || ||| || || | ||| | ||| || ||| Sbjct 1428299 TTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTTACCG 1428240 Query 133635 GTCAGAGTTTTTACGAAAATCTGCA 133659 |||| || || |||||| ||||| Sbjct 1428239 GTCAAGGTCTTAACGAAA--CTGCA 1428217 >seq1 Length=3147266 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| ||| | || || ||||||||||| || Sbjct 843212 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTGCTTACCG 843153 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || | ||||||||| || ||||| || |||||||| ||||| |||| Sbjct 843152 GCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGAATCTTGGACTTG 843093 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||||| | ||| || || | || | || || ||||||| || Sbjct 843092 ACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGTGTAATAGTCTTACCGGTCAAGGTC 843033 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 843032 TTCACGAAAATTTGCAT 843016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420727486880