Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5 178 3e-39 seq6 150 4e-31 >seq5 Length=1593029 Score = 178 bits (196), Expect = 3e-39 Identities = 435/650 (67%), Gaps = 17/650 (3%) Strand=Plus/Minus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 || || || || || ||||| | ||||| || || || || || ||| | || | | Sbjct 214653 TCCTGTTTCCTACTTGGAATAGAAGATGACTCCATCGATGGCATATATAAGACTTTGCAC 214594 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGC 110639 | |||||||| || || || |||| || || ||| | || | | | ||| | Sbjct 214593 AAGACTGCTCTAATCTCGAAGGCTGCTGGTGGTATCGGTCTACATATATCTAACATTAGA 214534 Query 110640 TCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTA 110699 || | || ||| | || || | | || ||| |||||| || | || || ||| | Sbjct 214533 TCCACTGGTGCATACATTGCCGGATCAAATGGTACTTCAAACGGTATCGTACCTATGCTT 214474 Query 110700 AGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCA 110756 ||||| || || ||||||||| |||||| |||||||||| ||||||| || || Sbjct 214473 AGAGTGTTTAATAACACTGCAAGATATGTTGATCAAGGTGGTAATAAGAGACCAGGTGCA 214414 Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTT-CGTAA 110815 ||||| |||||| | ||||| |||||| | ||| | | || |||||| ||||| | || Sbjct 214413 TTTGCCATCTATTTGGAACCATGGCATGCTGATGTGATGGATTTCTTA-AACTTAAGGAA 214355 Query 110816 AAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGA 110875 ||||| ||| ||||| ||||| |||||||| || ||||| | ||||| |||| Sbjct 214354 GAATCATGGAAAGGAAGAGATGAGAGCTCGTGATTTGTTCTATGCTCTATGGATCCCAGA 214295 Query 110876 TTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGT-GTCCTCATCGTT 110934 | |||||||| || ||| | || ||| |||| ||| | | |||| || | Sbjct 214294 TCTATTCATGGAAAAAGTTGAGAAAGATGAAGAATGGT-GCTTGTTTAGTCCAGATGATG 214236 Query 110935 CTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAA 110994 |||||||| | ||| | ||||| | | |||| | || || | ||||||| Sbjct 214235 CTCCTGGTTTGAATGAGATGTATGGTGATGCATTTGTTCAACTGTATCACAAATATG--- 214179 Query 110995 AAGAAGGCAAGTTTCGCAAACAA----ATTCCAGCTCAAGAACTT-TGGTTCAAAATCCT 111049 |||||| | | || ||||| || ||| |||| |||| || ||| | |||| | Sbjct 214178 -AGAAGGAAGGATTGGCAAAGAAGAAGATTAAGGCTC-AGAAGTTATGGCACTCAATCTT 214121 Query 111050 TGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAA 111109 || || |||||||||||||| ||||| || | ||||| ||| | |||| | || Sbjct 214120 GGAGTCTCAAGTTGAAACTGGTGGTCCTTTCATGCTCTATAAGGATGCTTGTAATAGAAA 214061 Query 111110 ATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 |||||| | |||||| || ||||| ||||| || ||||| |||| Sbjct 214060 GAGTAATCAGAAGAATTTGGGTACAATCAAGTCCTCGAACTTGTGTTGTG 214011 Score = 87.8 bits (96), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 131795 ATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTC- 131853 ||||| ||||| || || |||||| | | ||||||| ||||| || || ||| Sbjct 293762 ATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAAGAAGCC--TTGTTCG 293705 Query 131854 -TACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTG 131912 | |||||||| || ||||| |||||||||||| ||||| || ||| | || Sbjct 293704 GTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTCCTTTGCCT 293645 Query 131913 CTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCA 131972 |||| || ||| | |||||| | || |||||||| || | | || || ||| | || | Sbjct 293644 CTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAATGAGTTGA 293585 Query 131973 TCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 | | | ||||||| ||||| ||||| ||||| Sbjct 293584 TTTGCCGTGATGAAGGTTTGCACACTGACTTTGC 293551 >seq6 Length=1133955 Score = 150 bits (166), Expect = 4e-31 Identities = 460/705 (65%), Gaps = 7/705 (1%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||||||||| || | || | |||| || | ||||| ||||| | || Sbjct 479625 ACTACTTTGGTTTCAAGACATTGGAGAGATCTTACTTGTTGCGTGTTAATGGTAAAGTCG 479566 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 ||||||||| || || || | | | || || || ||||| ||||| ||||||| Sbjct 479565 CTGAACGTCCACAGCATTTGATCATGAGAGTCGCTATCGGTATCCATGGTAGAGATATTA 479506 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACTCCT 110480 || | |||||||| |||| | | | | | | || | | | || ||| |||| Sbjct 479505 AATCAGTTATTGAGACTTATAACCTCATGTCTGAGA-GATACTTCACCCACGCTTCTCCA 479447 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || | || ||||| || || ||| || | ||||| || ||| | | || Sbjct 479446 ACTTTGTTCAACGCTGGTACCCCACACCCACAGATGTCCTCTTGTTTCCTTGTGGCTATG 479387 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 | || ||||| || || ||||| ||||| || | ||| || ||| | || || || Sbjct 479386 AGAGAAGATTCCATCGAGGGTATCTATGAGACTTTGAAACAATGTGCCTTGATCTCCAAG 479327 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 | | |||| || || ||| | ||| | ||| | || | | | ||| | | || || Sbjct 479326 ACCGCTGGTGGTATCGGTTTACACATCCATAACGTTAGAGCTACAGGCTCTTACATTGCT 479267 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | || ||| |||| | || | |||||||| | | ||||| ||| ||||||| Sbjct 479266 GGTACTAACGGTACTTCTAACGGTTTGATTCCAATGGTTCGTGTCTTTAACAACACTGCT 479207 Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777 || || | ||||||||| |||||| ||| ||||||| | ||| | ||||| Sbjct 479206 CGTTACGTCGACCAAGGTGGTAACAAGAGACCTGGTGCATTTGCCCTTTATTTGGAACCA 479147 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||| ||||||| ||||| ||| | || || | || ||||| || ||||| Sbjct 479146 TGGCACGCAGATATCTTTGATTTCATCGACATTAGAAAGAATCACGGTAAAGAAGAGATC 479087 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 ||||| |||||||| || ||| ||||||| | ||||| |||||| |||||||| || Sbjct 479086 AGAGCTCGTGATTTGTTCCCAGCATTGTGGATCCCTGATTTGTTCATGGAACGTGTTGAA 479027 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGA-TGTATA 110956 ||||| ||| || | | | ||| || | || ||||| |||| ||| || Sbjct 479026 TCTAATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGACTGT-TA 478968 Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG 111001 ||| | || || | | ||||| || || ||||| |||||||| Sbjct 478967 TGGTGATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGG 478923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812617527532