Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 2e-15 seq7 93.3 3e-14 >seq1 Length=3147266 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || |||||| ||| || || |||||||| ||||| Sbjct 843699 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 843640 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || | || || || ||||| || | | |||||| || | || Sbjct 843639 CAAGGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGG 843580 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || | | ||| | ||| | ||||| ||||| | Sbjct 843579 AATACCTTCCTTGTCTTGAATCTT-AGACTTAACGTTGTCAATAGTGTCAGAGGATTCAA 843521 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| || || || || ||||||||||||||| Sbjct 843520 CCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATA 843471 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| || |||||| ||| || || |||||||| ||||| Sbjct 843243 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 843184 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || || | || || ||||| || || | | |||||| || | || Sbjct 843183 GAGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGG 843124 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| || | | || | ||| | ||||||| || || | Sbjct 843123 GATACCCTCCTTGTCCTGAATCTT-GGACTTGACGTTGTCAATGGTGTCGGAAGACTCAA 843065 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || ||||| || || || || || || || |||||| Sbjct 843064 CCTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCATA 843015 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| || |||||| ||| || || |||||||| ||||| Sbjct 843015 ACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 842956 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | || || | || || |||||||| || | | ||||||||| |||| Sbjct 842955 AAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGG 842896 Query 33642 CACACCTTCTTTGTC 33656 | ||| || ||||| Sbjct 842895 GATACCCTCCTTGTC 842881 >seq7 Length=431226 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | | |||||| || || ||| ||| || || |||||||| || | Sbjct 275146 CACCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAG 275087 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || | | || || | || || |||||||| || | | |||||| || | | Sbjct 275086 AAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTG 275027 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||||||||| || || | | |||| ||| | |||||| || || Sbjct 275026 GGATACCTTCTTTGTCCTGGATCTT-GGACTTGACATTGTCAATAGTGTCGGAAGACTCA 274968 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||| || | || || |||||||||||||| Sbjct 274967 ACCTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCAT 274918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703951927040