Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 3e-20
seq7 102 2e-16
seq4 86.0 1e-11
>seq1
Length=3147266
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || | || || || || || || | || || ||| ||||||
Sbjct 843475 CAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCTGAC 843534
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||||| || ||||| ||| || ||| ||
Sbjct 843535 ACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAG 843594
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||||||||| || || |||||| | || ||||| || || ||| |||| |||||| |
Sbjct 843595 AGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAACATT 843654
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| ||||| ||||||||| | || ||||||
Sbjct 843655 CAGAAGGAGTCCACTCTTCACTTGGTGTTGAGA 843687
Score = 107 bits (118), Expect = 5e-18
Identities = 103/132 (78%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || || || || || || ||| || ||||||||||||||||| |||
Sbjct 843100 AAGATTCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTTATCTTCGCCGGTAAG 843159
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | |||||||| || || | |||| |||||| ||||||| ||||| |||||||||
Sbjct 843160 CAGCTCGAAGATGGCAGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCAC 843219
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 843220 TTGGTTTTGAGA 843231
Score = 91.5 bits (100), Expect = 3e-13
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
||||||||| | ||||||||| ||||| ||||||| || ||||| | | || || ||
Sbjct 843231 TCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCC 843172
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
|||||| |||||||| ||||||||||||||
Sbjct 843171 ATCTTCGAGCTGCTTACCGGCGAAGATAAG 843142
Score = 89.7 bits (98), Expect = 1e-12
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || || || || || ||| || || ||||||||||| ||||| |||
Sbjct 842872 AAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAG 842931
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| || || | |||| |||||| | ||||| ||||| |||||||||
Sbjct 842932 CAGCTTGAGGATGGTAGAACCCTTTCCGACTACAACATTCAGAAGGAGTCCACTCTTCAC 842991
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 842992 TTGGTCTTGAGA 843003
Score = 89.7 bits (98), Expect = 1e-12
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || || || || || || ||| || ||||||||||| ||||| |||
Sbjct 843328 AAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTTATCTTTGCCGGTAAG 843387
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | |||||||| || || | |||| |||||| | ||||| ||||| || ||||||
Sbjct 843388 CAGCTTGAAGATGGTAGAACCCTCTCCGACTACAACATTCAGAAGGAGTCAACCCTTCAC 843447
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 843448 TTGGTTTTGAGA 843459
>seq7
Length=431226
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || ||||| || || || ||||||||||| || || ||| |||
Sbjct 274921 CAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCCGAC 274980
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || |||||||| || || ||| ||
Sbjct 274981 ACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAGCAG 275040
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||||||||| ||||| |||||| | || ||||| || || | | || |||||| |
Sbjct 275041 AGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAACATT 275100
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| || ||||||
Sbjct 275101 CAGAAGGAGTCCACCCTTCAC 275121
>seq4
Length=1873953
Score = 86.0 bits (94), Expect = 1e-11
Identities = 110/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 101529 CGGCAGCTTCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGA 101588
||||| |||| || ||||| || | || || || |||||||| | ||| ||||| |||
Sbjct 475180 CGGCAACTTCGGCGACCTTACGAATATAGTTATGTCTCTTCTCTTCTCTCAATCTGGCGA 475121
Query 101589 AACGAAGGGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGAC-GTCAAAATTA 101647
|||| | || || || || || || ||||| ||||||||||| ||| || || ||
Sbjct 475120 AACGGACAGCGGACTGACCACCTCTTCCGTGCTTCTTTGGCAAGTCGACGGTGAACTTTG 475061
Query 101648 TGAAGAATTTTCTTGGTGTTCCCAGAGAG 101676
||| || ||| ||||||| ||||||||
Sbjct 475060 TGATGACGGTTC-TGGTGTTACCAGAGAG 475033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820618295052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |