Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 114 3e-20 seq7 102 2e-16 seq4 86.0 1e-11 >seq1 Length=3147266 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || || || || || || | || || ||| |||||| Sbjct 843475 CAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCTGAC 843534 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || ||||| ||| || ||| || Sbjct 843535 ACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAGCAG 843594 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||||||||| || || |||||| | || ||||| || || ||| |||| |||||| | Sbjct 843595 AGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAACATT 843654 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||| ||||| ||||||||| | || |||||| Sbjct 843655 CAGAAGGAGTCCACTCTTCACTTGGTGTTGAGA 843687 Score = 107 bits (118), Expect = 5e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || || || || ||| || ||||||||||||||||| ||| Sbjct 843100 AAGATTCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTTATCTTCGCCGGTAAG 843159 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | |||||||| || || | |||| |||||| ||||||| ||||| ||||||||| Sbjct 843160 CAGCTCGAAGATGGCAGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCAC 843219 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 843220 TTGGTTTTGAGA 843231 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 ||||||||| | ||||||||| ||||| ||||||| || ||||| | | || || || Sbjct 843231 TCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCC 843172 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 |||||| |||||||| |||||||||||||| Sbjct 843171 ATCTTCGAGCTGCTTACCGGCGAAGATAAG 843142 Score = 89.7 bits (98), Expect = 1e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || || || ||| || || ||||||||||| ||||| ||| Sbjct 842872 AAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAG 842931 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| || || | |||| |||||| | ||||| ||||| ||||||||| Sbjct 842932 CAGCTTGAGGATGGTAGAACCCTTTCCGACTACAACATTCAGAAGGAGTCCACTCTTCAC 842991 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 842992 TTGGTCTTGAGA 843003 Score = 89.7 bits (98), Expect = 1e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || || || || ||| || ||||||||||| ||||| ||| Sbjct 843328 AAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTTATCTTTGCCGGTAAG 843387 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | |||||||| || || | |||| |||||| | ||||| ||||| || |||||| Sbjct 843388 CAGCTTGAAGATGGTAGAACCCTCTCCGACTACAACATTCAGAAGGAGTCAACCCTTCAC 843447 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 843448 TTGGTTTTGAGA 843459 >seq7 Length=431226 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| || || || ||||||||||| || || ||| ||| Sbjct 274921 CAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCCGAC 274980 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || |||||||| || || ||| || Sbjct 274981 ACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAGCAG 275040 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||||||||| ||||| |||||| | || ||||| || || | | || |||||| | Sbjct 275041 AGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAACATT 275100 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| || |||||| Sbjct 275101 CAGAAGGAGTCCACCCTTCAC 275121 >seq4 Length=1873953 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 101529 CGGCAGCTTCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGA 101588 ||||| |||| || ||||| || | || || || |||||||| | ||| ||||| ||| Sbjct 475180 CGGCAACTTCGGCGACCTTACGAATATAGTTATGTCTCTTCTCTTCTCTCAATCTGGCGA 475121 Query 101589 AACGAAGGGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGAC-GTCAAAATTA 101647 |||| | || || || || || || ||||| ||||||||||| ||| || || || Sbjct 475120 AACGGACAGCGGACTGACCACCTCTTCCGTGCTTCTTTGGCAAGTCGACGGTGAACTTTG 475061 Query 101648 TGAAGAATTTTCTTGGTGTTCCCAGAGAG 101676 ||| || ||| ||||||| |||||||| Sbjct 475060 TGATGACGGTTC-TGGTGTTACCAGAGAG 475033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820618295052