Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 9e-16 >seq1 Length=3147266 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || || || || | || || |||| || || || | Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || || || || || || |||||||| || || || ||| Sbjct 843304 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 843363 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||||| || | | ||| || || || ||||||| ||||| || ||| ||||| Sbjct 843364 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 843423 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || || || ||| |||| || || || ||||||||||| || Sbjct 843424 ATTCAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 843470 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || || |||||||| ||||| |||||||| ||||| || | | ||| || || || || Sbjct 842881 GACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAG 842940 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 |||| ||||| | ||| ||||| ||||| || || ||||| |||| || || || Sbjct 842941 GATGGTAGAACCCTTTCCGACTACAACATTCAGAAGGAGTCCACTCTTCACTTGGTCTTG 843000 Query 25388 AGATTGAGAGGAGG 25401 ||||||||||| || Sbjct 843001 AGATTGAGAGGTGG 843014 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || ||||| || | || || | || || || | | Sbjct 843016 ATGCAAATTTTCGTGAAGACCTTGACCGGTAAGACTATTACACTTGAGGTTGAGTCTTCC 843075 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || || ||| || || |||||||| || || || ||| Sbjct 843076 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAG 843135 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||||| || | || ||| || || |||||||||| |||| || ||| ||||| Sbjct 843136 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 843195 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || || ||||| |||| || || || ||||||||||| || Sbjct 843196 ATCCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 843242 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || || || || || | || || |||| || ||| || Sbjct 843472 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 843531 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || || ||| || || || ||||| || || || ||| Sbjct 843532 GACACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 843591 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || ||||| || | | || || || || || |||| ||||| |||| ||| |||| Sbjct 843592 CAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTC--CGACTACA 843649 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | ||||| || || ||||| |||| || ||||| ||||||||||| || Sbjct 843650 ACATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 843698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094333235840