Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
seq7 105 6e-18
seq4 91.5 1e-13
>seq1
Length=3147266
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || | || |||||| ||||||||||| |||| |
Sbjct 843698 CCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 843639
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| | || || ||||||||||| ||||| || | | ||||||||| | |||
Sbjct 843638 AAGGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGA 843579
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||| ||||| ||| | |||| | | ||||| ||||| ||
Sbjct 843578 ATACCTTCCTTGTCTTGAATCTTAGACTT-AACGTTGTCAATAGTGTCAGAGGATTCAAC 843520
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | || || || ||||| ||||| || || ||||| ||||||||
Sbjct 843519 CTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| ||||| || | || |||||| ||||||||||| ||||
Sbjct 843470 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAG 843411
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || || ||||||||||| ||||| || | | ||||||||| | ||
Sbjct 843410 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 843351
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| |||||| ||| | |||| | | || ||| || || ||
Sbjct 843350 ATACCCTCCTTGTCCTGGATCTTAGACTT-AACGTTGTCAATAGTATCGGAGGACTCAAC 843292
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | || || || ||||| ||||| || ||||| || || |||||
Sbjct 843291 CTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| ||||| || | || |||||| || |||||||| ||||
Sbjct 843242 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 843183
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || || ||||||||||| || || || | | ||||||||| | ||
Sbjct 843182 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 843123
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| ||||| ||| | |||| | | |||||| || || ||
Sbjct 843122 ATACCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCAAC 843064
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | || || || ||||| ||||| || ||||| || || |||||
Sbjct 843063 CTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016
>seq7
Length=431226
Score = 105 bits (116), Expect = 6e-18
Identities = 169/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555
|||||| || ||||||| | || || | |||||| || | || |||||| ||||
Sbjct 275157 TCTCTTC-TTACCACCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAA 275099
Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615
||||||| || | | ||||| | || || ||||||||||| ||||| || | | ||
Sbjct 275098 TGTTGTAGTCAGAAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCT 275039
Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675
||||||| | || | | || |||||| |||||| ||| | | | | | ||||
Sbjct 275038 GCTGGTCAGGTGGGATACCTTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGT 274979
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
|| || || ||||||| ||||| || |||||||| | || || ||||| |||||||
Sbjct 274978 CGGAAGACTCAACCTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCA 274919
Query 35736 T 35736
|
Sbjct 274918 T 274918
>seq4
Length=1873953
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || || | |||||||| || || |||||| || |||||||| || |
Sbjct 1428440 CCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1428381
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| |||| || ||||||||||| || || || | | ||||||||| | ||
Sbjct 1428380 AGGGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 1428321
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| |||||| ||| | |||| | | ||||| || || ||
Sbjct 1428320 ATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCAGAGGACTCAAC 1428262
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
||||| || || || ||||| ||||| || || || ||
Sbjct 1428261 CTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 1428223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793532380960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |