Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq6 363 2e-95 seq5 219 6e-52 >seq6 Length=1133955 Score = 363 bits (402), Expect = 2e-95 Identities = 1421/2207 (64%), Gaps = 59/2207 (3%) Strand=Plus/Plus Query 68412 ATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTT 68471 |||||||||||| || |||| ||| |||| |||||||| |||||| || | || Sbjct 477827 ATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTT 477886 Query 68472 GGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCC 68531 | ||||| | || ||||| |||| |||||| |||||| |||||||| | Sbjct 477887 ACCCATAGTTGGAGCTCTAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGC 477946 Query 68532 TCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAA 68589 | ||| || ||||| | || ||| ||||||||| ||| ||||||| ||||| | || Sbjct 477947 ACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAA 478006 Query 68590 ATCTGTTTGATATCATCTGGAAGGCTCG-TA--TTTTGAATGGATCCACCATCGGATATA 68646 |||| || | || | ||||| | | | || |||||||| || || ||| || || Sbjct 478007 ATCT--TTCAATTCCTTTGGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATG 478064 Query 68647 ATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGC 68706 || | |||| || |||| ||| | || ||| | | ||| | || Sbjct 478065 ATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATAT 478124 Query 68707 GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATAT 68766 || ||||| || || ||||| |||| | || | ||||| |||||| ||| || ||| Sbjct 478125 GGGTTAACAATCTGGAATTCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTAT 478184 Query 68767 GGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCC 68826 ||||| | | |||| || | |||| ||||||| ||| || ||||||||||| || || Sbjct 478185 GGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCA 478244 Query 68827 ACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCC 68886 || | ||| ||||| | ||| | | | || | | | || ||| | ||||||| Sbjct 478245 ACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCC 478304 Query 68887 CAAAGATCAGATGGTACAACATTCC--AAAGATCGTATTGTAGAATTCCGTTACTTGCAT 68944 || | ||| || || | |||| |||| || | || || || ||| || Sbjct 478305 CACAAATCGGAAGG--CTTTCTTCCCCAAAGGTCAAACTGAAGCTGACCCTTAGAAGCTG 478362 Query 68945 ATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTA 69004 || || | ||| ||| || || ||||| | || || ||| | | ||| | Sbjct 478363 GGGAACCTTGGAATGATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCA 478422 Query 69005 ATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTAT 69064 | ||| ||| |||||| || ||||| |||| | || | || | || | | | | Sbjct 478423 AAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT 478482 Query 69065 CGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAG 69124 | ||||| || | |||| ||||| ||||| || || || ||||| || | | || | Sbjct 478483 CAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTG 478542 Query 69125 GTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 69184 |||| | |||| |||| || || ||||||||| | || || || ||| || || | Sbjct 478543 GTCTGTTTCTCATATTGGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGA 478602 Query 69185 TTTTATT-AAGAT--TTCGGACTACT------ACTTTAACCA--CGTCCT------TTAG 69227 || | || ||| | || ||| || | || | || ||| | | || Sbjct 478603 TTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAG 478662 Query 69228 TTTGAG----AAAATCAAATCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTA 69283 | |||| | ||||| | || || | || | || ||| | || || | Sbjct 478663 TCTGAGTGGTACCATCAAGGGATTTTTCAATGA--AAGCTGG-CAATGCAATGGAGGCCA 478719 Query 69284 GATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTAC 69343 |||||||| || || || | | | | |||| | ||||| ||| | ||| Sbjct 478720 AGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAG 478779 Query 69344 TACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAA 69403 | | ||||| | |||| || | ||| ||| |||| | ||||||||| |||||||||| Sbjct 478780 AAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAA 478839 Query 69404 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT-- 69461 | || || ||||||||||| ||| |||| | || | || | | ||| | || | Sbjct 478840 GCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACA--ACTTTTG 478897 Query 69462 AGCATTTATTACGGTCTTG-TAACGCTTC--TCTTTTTCATA-TTGTG-TATATAGCCGT 69516 ||| || | | ||||| || | | | ||||| ||||| || | || | |||| | Sbjct 478898 AGCCTTGA---CAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT 478954 Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||||||| || || ||| | | || || |||||||||| | | ||| | | Sbjct 478955 --GAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTC 479012 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || ||| | | ||| |||| ||| || | ||| || ||||| | ||| || Sbjct 479013 CATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAAC 479072 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 | ||| | | ||| | ||||| || || ||| ||| ||| |||| || || | Sbjct 479073 AAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAG 479132 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 ||||| | ||||||||||| | ||| | || | | || |||| || || || || Sbjct 479133 ATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCT 479192 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | ||| | |||||||| ||| |||| | | ||| ||||| | ||| ||||| Sbjct 479193 TGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAA 479252 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 |||| || || |||| ||| ||| ||| | || | || ||| || || ||| Sbjct 479253 GTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCG 479312 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || | || ||||| | ||||| ||||||| || ||||| |||||||| Sbjct 479313 ATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCG 479372 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 ||| ||| ||| |||| | ||| ||||| ||||| || | ||| || || Sbjct 479373 ATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCA 479432 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || || || || || ||||| ||||| ||||| || | ||||| | || || || || Sbjct 479433 GCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTC 479492 Query 70057 TCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 |||||| |||||| ||||| | ||| || || || ||||| | ||| | || |||| Sbjct 479493 TCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCATGATCAAATGC 479552 Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176 || || ||||| | |||| ||| | ||||| ||| ||| | |||| || || Sbjct 479553 TGTGGACGTTCAGCGACTTTACCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTG 479612 Query 70177 AACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTAT 70234 || ||||| ||||| || ||||| ||||| ||||| || || |||| | | | | Sbjct 479613 AAACCAAAGTAGTTATAGTTGAAA--TCTCTATCGTAGATGATGGCAGAGTCCAACTCGT 479670 Query 70235 CCTTATATTTGGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCA 70293 | || | | ||| || | ||||| | | || | |||||||| | | | Sbjct 479671 CTTTGAACTCTTGAACAATGT-CATAAGTTTCCTTAGACAACATCGGAGAATGGAGATCG 479729 Query 70294 TTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTT 70353 | || || |||| |||||| | | ||||| | ||| | || |||| | ||| Sbjct 479730 GTCTTTGGGTTAATGTAGTTGTAAAGCTCTTCGACAACAGAAGAGAACTGTTTAGTGGTT 479789 Query 70354 TCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGT 70413 | ||| || ||||| || ||||| ||||| || |||| | |||||||||| ||||| Sbjct 479790 TGCTTATGCAAATTAGAGATGGCAATTCTAGCAGCTAAAGTAGCATAGTCTGGATGAACA 479849 Query 70414 GTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCG 70473 ||||| | ||| | || ||||| || |||| || || ||||| || || || Sbjct 479850 GTAGTCATATAAGCACAAGTCTCAGCAGCCAAGTTATCCAACTCGATAGTGGTGACACCT 479909 Query 70474 TTATATAGCCCTTGAATAA--CTTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGT 70531 | ||| | || || | |||| | | || || | | ||| || ||||| | Sbjct 479910 TCATAAACACCAGAGATGATTCTTTGA--GTGATCTTAACGGCATCAATATGTTCTGGAT 479967 Query 70532 TCAGACCATAACATAATTTTCTAATACGAGATGTAATTTTATCAAAC 70578 ||||||||||||| | | || | || |||||| ||||||||| Sbjct 479968 CAAGACCATAACATAGTCTAGAGATTCTAGCTGTAATCTTATCAAAC 480014 >seq5 Length=1593029 Score = 219 bits (242), Expect = 6e-52 Identities = 430/625 (69%), Gaps = 8/625 (1%) Strand=Plus/Plus Query 69349 TTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATA 69408 ||||| || |||| ||| | ||||||||||||| | ||||| || ||||| || || || Sbjct 214031 TTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCATG 214090 Query 69409 AACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTT 69468 || ||| ||||||||||| ||||| || | || || | ||| | | ||| || Sbjct 214091 AAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATAACTTCTGAGCCTTA 214150 Query 69469 ATTACGGTCTTGTAACGCTTCT-CTTTTTCATATTGTGT-ATATAGCCGTTCGAATTCAT 69526 || |||| | | | || | || ||||||| ||| ||| || | | ||| ||| Sbjct 214151 ATCTTCTTCTT-TGCCAATCCTTCCTTCTCATATT-TGTGATACAGTTGAACAAATGCAT 214208 Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586 | || | | |||| ||| |||||| |||| ||||| | ||| |||| | |||| Sbjct 214209 CACCATACATCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTTCAT 214268 Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTG 69645 | | || |||| || ||| |||||||| || ||||| ||||| ||| || | ||| | Sbjct 214269 CTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGC-ATAGAACAAATCACGA 214327 Query 69646 GTTCTATTTTCTTCATTTCCTGTAtttttt-ttAAGATCGAGAAACTCCATAATATCAGA 69704 | ||| | ||||| ||||| ||| || ||||| | ||||| ||||| | ||||| Sbjct 214328 GCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAA-TCCATCACATCAGC 214386 Query 69705 ATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTAT 69764 |||||||||||| | ||| || || | | || |||| ||||| || || ||||| | Sbjct 214387 ATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAAC 214446 Query 69765 GTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATT 69824 ||||| |||||||||||| | ||||| ||||| || | ||||| || || ||||||| Sbjct 214447 ATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCATT 214506 Query 69825 TGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCC 69884 || ||| | ||| || || | | | ||| ||| ||| |||||| || || || Sbjct 214507 TGATCCGGCAATGTATGCACCAGTGGATCTAATGTTAGATATATGTAGACCGATACCACC 214566 Query 69885 TGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATC 69944 || || |||||||||||| | ||| || | |||||| || || ||| || Sbjct 214567 AGCAGCCTTCGAGATTAGAGCAGTCTTGTGCAAAGTCTTATATATGCCATCGATGGAGTC 214626 Query 69945 ATCTATCATGTTAAGAAGAAAACAG 69969 |||| || ||| || |||||| Sbjct 214627 ATCTTCTATTCCAAGTAGGAAACAG 214651 Score = 199 bits (220), Expect = 5e-46 Identities = 409/606 (67%), Gaps = 8/606 (1%) Strand=Plus/Plus Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658 ||||| ||||| || ||||| |||||| || | || ||||| | | ||| || Sbjct 293530 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 293589 Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 || ||||| || || | || ||||| | ||| | ||| || | ||| || || | ||| Sbjct 293590 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 293649 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA- 39777 || || ||||| |||||||| ||||| || || ||||| |||||||||||||| ||| | Sbjct 293650 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 293709 Query 39778 ---ACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834 ||| | |||| ||||| || ||||||||||| |||||||| | ||| || Sbjct 293710 AAGGCTTCT-TCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGG 293768 Query 39835 CATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATC 39894 || || || || |||||||| | ||| | | | ||| || | ||| || || Sbjct 293769 AATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTC 293828 Query 39895 TATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAA 39954 || || ||| || | || || || ||||| || ||| || || || ||||| || Sbjct 293829 AATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAA 293888 Query 39955 ACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCAC 40014 ||| | ||||| | |||||| ||||| | | | || | || |||| || ||||| || Sbjct 293889 ACACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAAC 293948 Query 40015 TATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGG 40074 || || ||| ||||||||| || || | ||| | || || | ||||| Sbjct 293949 GATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTC 294008 Query 40075 TGTCAAT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 40131 ||||| || ||||| |||| | ||| || || | ||| | || ||||| ||||| Sbjct 294009 ATTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCA 294068 Query 40132 AAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191 || || || || ||||| ||||| | ||| || ||| | || | ||||| |||| Sbjct 294069 GAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAAG 294128 Query 40192 AACAAA 40197 |||||| Sbjct 294129 AACAAA 294134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908696963680