Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 1e-31
seq4 129 5e-25
>seq5
Length=1593029
Score = 150 bits (166), Expect = 1e-31
Identities = 397/591 (67%), Gaps = 19/591 (3%)
Strand=Plus/Minus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| | |||| || ||||| || ||||| ||||| || || | || || || ||
Sbjct 294126 TTTCCCAATCAAGTACCATGAGATCTGGCAGGCATACAAGAAGGCTGAAGCTTCTTTCTG 294067
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATTAAAACCAC 43826
||| || || || |||||||| |||| || || ||| |||||| || | | |
Sbjct 294066 GACCGCTGAGGAGATTGATTTGTCTAAGGATTT-GCATGATTGGAA--CAACAGATTGAA 294010
Query 43827 A-AGAAA-AACATTTTAT-ATCTTTGGTTTTG--GCGTTTTTTGCTGCGAGCGACGGGAT 43881
|||| ||| ||| | |||| | || || || || ||||| || ||||| ||
Sbjct 294009 TGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTAT 293950
Query 43882 AGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940
|| ||||| || |||||| || | | || || || ||| | |||||||| |
Sbjct 293949 CGTTAATGAGAACTTGGTTGAGAACTTCTCTGCC-GAGGTGCAAATTCCAGAAGCTAAGT 293891
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
|||| || || || ||||| || || || ||||| || || | ||| ||| |||
Sbjct 293890 GTTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGA 293831
Query 44001 TAGATACGTACATCAAAGATGGGCACGAGAAGCATCGA--TTGTTTAATGCGATAGAAAC 44058
| || || || ||||| ||| ||| | | || | ||||||||||| || || ||
Sbjct 293830 TTGACACTTATATCAAGGATC--CACAACAGGCTGAGTATTTGTTTAATGCCATTGAGAC 293773
Query 44059 AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAATGA 44115
| || ||||| | || || || ||||| | | |||||| || | | |
Sbjct 293772 TATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAAGAAGC 293713
Query 44116 TTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATC 44175
| || || || ||||||| || ||||| | ||| ||||| || ||||| || || ||
Sbjct 293712 CTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTC 293653
Query 44176 GTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAA 44235
||||| | || || ||||| ||||| ||||||||||||| || ||||| || || ||
Sbjct 293652 CTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAA 293593
Query 44236 TGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286
|||||| || | ||||||||||| || || || ||||| || |||||
Sbjct 293592 TGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCCTGTTTGTT 293542
>seq4
Length=1873953
Score = 129 bits (142), Expect = 5e-25
Identities = 360/543 (66%), Gaps = 16/543 (3%)
Strand=Plus/Minus
Query 19257 TAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGT 19316
||| |||||| | | |||||| | | || || | |||||| | || || | | |||
Sbjct 797194 TAAGGAGTTTACCCAGATCTTTAGACGTGCGTTCGCCTCGCGTATCTTCCCTCCTGCTGT 797135
Query 19317 CATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTT 19375
|| ||| |||||| || | || || || | ||||| ||||| || ||||||
Sbjct 797134 TGTTGAACGATTGGGTATCTCC-CACGTGAAGGGTATGTTGCTCTATGGTCCTCCGGGTA 797076
Query 19376 GTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAAAC-AACCTCCCAAA 19434
||| || ||| | ||||| ||| | || ||||| | || ||| | || |||||
Sbjct 797075 CTGGTAAGACACTCATTGCTAGAAAGATTGGTAAAATGCT--CAATGCTAAGGAACCAAA 797018
Query 19435 -ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACG 19493
||||| |||||||| ||| |||| || | ||| ||| ||| ||||| || | |
Sbjct 797017 GATTGTTAATGGTCCAGAAGTCTTGTCCAAGTTTGTTGGTTCATCCGAAGAGAACATTAG 796958
Query 19494 ACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC--TTTG 19551
| |||||| || ||||| |||| | | || | | || | | ||| | |||
Sbjct 796957 AAATTTGTTCAAAGATGCTGA-GAAGGAATACAAGGAAAAAGGTG-AGGAGTCCGGTTTA 796900
Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC------TGGT 19605
||||| || ||| | ||||| ||||| | | | |||||||||||||| || |
Sbjct 796899 CACATCATTATATTTGATGAGTTGGATTCTGTGTTCAAGCAAAGAGGTTCAAGAGGTGAT 796840
Query 19606 GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665
| | ||| || ||| | || |||||||| ||| || |||| | || ||||| |
Sbjct 796839 GGTACTGGTGTCGGTGATAACGTCGTCAATCAGCTCTTGGCAAAGATGGATGGTGTCGAT 796780
Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCC 19725
||| |||| || || || || ||||| |||||||| |||| || || || || | |||
Sbjct 796779 CAATTGAACAACATCTTGGTGATTGGTATGACTAACAGACGTGACTTGATTGATAATGCC 796720
Query 19726 TTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGA 19785
| || || || ||||| || || | | |||| || | || || |||||| ||||
Sbjct 796719 CTCTTGCGTCCTGGTCGTTTCGAGGTTCAAGTCGAGATCCATTTGCCAGATGAACATGGA 796660
Query 19786 CGT 19788
|||
Sbjct 796659 CGT 796657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455941872060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |