Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq5 150 1e-31 seq4 129 5e-25 >seq5 Length=1593029 Score = 150 bits (166), Expect = 1e-31 Identities = 397/591 (67%), Gaps = 19/591 (3%) Strand=Plus/Minus Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767 ||||| | |||| || ||||| || ||||| ||||| || || | || || || || Sbjct 294126 TTTCCCAATCAAGTACCATGAGATCTGGCAGGCATACAAGAAGGCTGAAGCTTCTTTCTG 294067 Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATTAAAACCAC 43826 ||| || || || |||||||| |||| || || ||| |||||| || | | | Sbjct 294066 GACCGCTGAGGAGATTGATTTGTCTAAGGATTT-GCATGATTGGAA--CAACAGATTGAA 294010 Query 43827 A-AGAAA-AACATTTTAT-ATCTTTGGTTTTG--GCGTTTTTTGCTGCGAGCGACGGGAT 43881 |||| ||| ||| | |||| | || || || || ||||| || ||||| || Sbjct 294009 TGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTAT 293950 Query 43882 AGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940 || ||||| || |||||| || | | || || || ||| | |||||||| | Sbjct 293949 CGTTAATGAGAACTTGGTTGAGAACTTCTCTGCC-GAGGTGCAAATTCCAGAAGCTAAGT 293891 Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000 |||| || || || ||||| || || || ||||| || || | ||| ||| ||| Sbjct 293890 GTTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGA 293831 Query 44001 TAGATACGTACATCAAAGATGGGCACGAGAAGCATCGA--TTGTTTAATGCGATAGAAAC 44058 | || || || ||||| ||| ||| | | || | ||||||||||| || || || Sbjct 293830 TTGACACTTATATCAAGGATC--CACAACAGGCTGAGTATTTGTTTAATGCCATTGAGAC 293773 Query 44059 AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAATGA 44115 | || ||||| | || || || ||||| | | |||||| || | | | Sbjct 293772 TATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAAGAAGC 293713 Query 44116 TTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATC 44175 | || || || ||||||| || ||||| | ||| ||||| || ||||| || || || Sbjct 293712 CTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTC 293653 Query 44176 GTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAA 44235 ||||| | || || ||||| ||||| ||||||||||||| || ||||| || || || Sbjct 293652 CTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAA 293593 Query 44236 TGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 |||||| || | ||||||||||| || || || ||||| || ||||| Sbjct 293592 TGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCCTGTTTGTT 293542 >seq4 Length=1873953 Score = 129 bits (142), Expect = 5e-25 Identities = 360/543 (66%), Gaps = 16/543 (3%) Strand=Plus/Minus Query 19257 TAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGT 19316 ||| |||||| | | |||||| | | || || | |||||| | || || | | ||| Sbjct 797194 TAAGGAGTTTACCCAGATCTTTAGACGTGCGTTCGCCTCGCGTATCTTCCCTCCTGCTGT 797135 Query 19317 CATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTT 19375 || ||| |||||| || | || || || | ||||| ||||| || |||||| Sbjct 797134 TGTTGAACGATTGGGTATCTCC-CACGTGAAGGGTATGTTGCTCTATGGTCCTCCGGGTA 797076 Query 19376 GTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAAAC-AACCTCCCAAA 19434 ||| || ||| | ||||| ||| | || ||||| | || ||| | || ||||| Sbjct 797075 CTGGTAAGACACTCATTGCTAGAAAGATTGGTAAAATGCT--CAATGCTAAGGAACCAAA 797018 Query 19435 -ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACG 19493 ||||| |||||||| ||| |||| || | ||| ||| ||| ||||| || | | Sbjct 797017 GATTGTTAATGGTCCAGAAGTCTTGTCCAAGTTTGTTGGTTCATCCGAAGAGAACATTAG 796958 Query 19494 ACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC--TTTG 19551 | |||||| || ||||| |||| | | || | | || | | ||| | ||| Sbjct 796957 AAATTTGTTCAAAGATGCTGA-GAAGGAATACAAGGAAAAAGGTG-AGGAGTCCGGTTTA 796900 Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC------TGGT 19605 ||||| || ||| | ||||| ||||| | | | |||||||||||||| || | Sbjct 796899 CACATCATTATATTTGATGAGTTGGATTCTGTGTTCAAGCAAAGAGGTTCAAGAGGTGAT 796840 Query 19606 GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665 | | ||| || ||| | || |||||||| ||| || |||| | || ||||| | Sbjct 796839 GGTACTGGTGTCGGTGATAACGTCGTCAATCAGCTCTTGGCAAAGATGGATGGTGTCGAT 796780 Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCC 19725 ||| |||| || || || || ||||| |||||||| |||| || || || || | ||| Sbjct 796779 CAATTGAACAACATCTTGGTGATTGGTATGACTAACAGACGTGACTTGATTGATAATGCC 796720 Query 19726 TTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGA 19785 | || || || ||||| || || | | |||| || | || || |||||| |||| Sbjct 796719 CTCTTGCGTCCTGGTCGTTTCGAGGTTCAAGTCGAGATCCATTTGCCAGATGAACATGGA 796660 Query 19786 CGT 19788 ||| Sbjct 796659 CGT 796657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455941872060