Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6 289 4e-73 seq5 125 9e-24 >seq6 Length=1133955 Score = 289 bits (320), Expect = 4e-73 Identities = 915/1406 (65%), Gaps = 43/1406 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | ||||||||||| || ||||| || | |||||||||||| | || || Sbjct 478166 GTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGA 478225 Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824 ||| ||||||||||| || | | ||||| ||| | | ||| | || || Sbjct 478226 GGCAGTTGGCATTGGAGCAACAAGCAAAGA--GTTTCTCAAACCGTACTTGACAATATCA 478283 Query 110825 TCCTTGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATGTCAAACT 110882 |||| ||| |||||| || | | | | |||| | |||| | |||||||| Sbjct 478284 GCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTTCTTC--CCCAAAGGTCAAACT 478341 Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAG 110942 ||||| || | || || || ||||| | || | ||| || | ||||| || | | Sbjct 478342 GAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATTCGTATGGACCTTCGGACTTGG 478401 Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 | | ||| | ||||| | |||||||| ||||| || ||||| || |||| Sbjct 478402 CGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCA 478461 Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 111062 ||||| || | || || ||||||| | || | | ||||| |||| || | || Sbjct 478462 ATTCCTTAGCCTTTTCAGATTCAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAAC 478521 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACG 111121 |||||||||| | |||| ||||||| || |||||| || |||| || ||| || Sbjct 478522 CTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATTGGAGTTTCTAGCT-TCTGGGACT 478580 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || | || | |||||||| || ||| | || || || |||| ||| | |||| | Sbjct 478581 GGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGA 478640 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTC---------------TCTTCATTGACATAC 111226 || | |||| | | | |||| |||| | |||| ||| | Sbjct 478641 TGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATCAAGGGATTTTTCAATGAAAGC- 478699 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | || || || ||||| || |||||||| || || || | ||| || Sbjct 478700 --TGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCG 478757 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | ||| || ||| ||||| ||| ||| ||| | ||||| ||||| |||||| ||||| Sbjct 478758 ACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTC 478817 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 | ||| || ||||||||||| |||||| | || || || ||||| ||||| | | || Sbjct 478818 TCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGG 478877 Query 111407 ATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTA 111465 || || | ||| ||| | | | || | ||| | | | || || || ||| || Sbjct 478878 ATTGCATACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGACCTTCTTTCTCATA 478936 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| || || || | || || ||||| ||| | ||||||||||| | | Sbjct 478937 CTTCTCATAAAGAGCCTTGAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATT 478996 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 |||| |||| | || ||||| |||| ||||| || | |||||| | || || || Sbjct 478997 TGGAGAGAACAAAGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGAT 479056 Query 111586 CCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644 ||||| | || || | ||| | | | | || |||||| | ||| || || || | Sbjct 479057 CCACAATGCTGGGAACAAATCACGAGCTCTGA-TCTCTTCTTTACCGTGATTCTTTCTAA 479115 Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA------GACTGCGATAG 111698 || | ||| || | |||||| ||||||||||| || | ||| | ||| || Sbjct 479116 TGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAG 479175 Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 || ||| | ||| |||| | || || || || ||| |||||| || |||| || Sbjct 479176 GTCTCTTGTTA---CCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCA 479232 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 ||||||| | ||| | || ||| || || || ||| ||| | ||||| | Sbjct 479233 TTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAA 479292 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 | | ||||||||| | || ||||| ||||| ||| ||||| ||||| | | | Sbjct 479293 CGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCA 479352 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 ||| |||||||||| | ||| || || || | | || | |||||| ||| ||||| Sbjct 479353 AAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACA 479412 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT- 111997 |||| || ||| |||||||| ||||| | ||||| | ||||| |||| || || Sbjct 479413 TCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAA-GTATCTC 479471 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | ||||| || || ||||| | || || | ||| ||| || ||||| ||||| Sbjct 479472 TCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATA 479531 Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083 ||||| | ||||| || | |||||| Sbjct 479532 GCGACTCTCATGATCAAATGCTGTGG 479557 >seq5 Length=1593029 Score = 125 bits (138), Expect = 9e-24 Identities = 205/292 (70%), Gaps = 14/292 (5%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||| ||||| ||| |||| | ||||| ||||| | ||| Sbjct 293550 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 293609 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 |||||| | ||| | |||||||||||| |||||| | || || || ||||||||||| Sbjct 293610 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGAT 293669 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTT-TGCAT--- 122833 ||| || ||| ||||| |||| ||| | || |||| | || ||| | ||| Sbjct 293670 ACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAA----CAAGGCTTCTTCATCGG 293725 Query 122834 CAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT 122893 ||| |||| ||| ||||| | |||||||||| ||||||||| | ||| | ||||| | Sbjct 293726 CAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCAT 293785 Query 122894 CAAATAACTGCT---TCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAA 122942 ||| || | || || || | |||||| || || |||||||||| Sbjct 293786 TAAACAAATACTCAGCCTGTT---GTGGATCCTTGATATAAGTGTCAATCAA 293834 Score = 118 bits (130), Expect = 1e-21 Identities = 105/129 (81%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTAT-TCAAGTTGGTGC 164662 |||||||||||||| ||||| |||||| | || |||||||| ||||| |||| ||||| Sbjct 980252 TATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAGCACGGTATCTCAA-CAGGTGC 980310 Query 164663 GGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGA 164722 ||||| ||||| | ||||| | ||||||||| || || ||||||||||| ||| | || Sbjct 980311 CGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTTGTTCTCTTCAACCACAGTGA 980370 Query 164723 CAAAGACTT 164731 ||| ||||| Sbjct 980371 CAAGGACTT 980379 Score = 95.1 bits (104), Expect = 2e-14 Identities = 169/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 181799 AGAAGCGTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTT 181858 ||| || || ||||||||||| | | ||||| || |||| |||| || | ||| Sbjct 649644 AGAGGCATCCTTACCACCCATCAATCTGGTACCGAAAGCACCATTTGGCAAGAGCAAGTT 649703 Query 181859 AATGTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACAC 181918 | |||||| || || | |||| | ||||| || | ||| || | | | ||| Sbjct 649704 CAAGTTGTTGGAGCCGACAAAGTCCTGAGCCAAGTTGATGATAGTCTGAACCAAAGACTG 649763 Query 181919 TTCACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCAT 181978 |||||||||||||||||||| ||| || | || || | |||||||| || ||||| || Sbjct 649764 TTCACCGTGGTGGTAAGCTGTCTTCTCTGAAATGTAACCAGCCAACTGGGCAACCTTGAT 649823 Query 181979 TTCATCTTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAG 182038 ||||| || | ||| | | || ||| || |||| | || || || ||||| | Sbjct 649824 TTCATTCTTCAAGTTTCTCTTCAAACAACCAAACATAATCTTTCTTTGACCTGGCTTCAA 649883 Query 182039 ACCATCC 182045 ||||||| Sbjct 649884 ACCATCC 649890 Score = 93.3 bits (102), Expect = 5e-14 Identities = 255/385 (66%), Gaps = 12/385 (3%) Strand=Plus/Plus Query 182519 ACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCG 182578 ||||||||| || |||||||| |||| ||||||||| | ||| | ||| ||||| | Sbjct 650373 ACCCTTGATATGGGAACCATCGGTATCCTGATCTGTCATGAGCATGATACGGCCATATC- 650431 Query 182579 AAGTTCAGAAACATCTTGG--TAGT-CTTTTCCTTGT--TGAAGACCAAGGATCTTCTTG 182633 ||| | || | || | || ||| | ||||| || | ||||| ||||| ||| Sbjct 650432 ----TCAAAGACTTGGTGTCCTCGTACTTCTTCTTGTGTTGCAAACCAATGATCTGCTTC 650487 Query 182634 AGATCATTGAACTCCTGGTTTGATGTA-AGCTGTGCCACCGAAGCGTCCCGAACATTCTT 182692 | |||||| |||| | || || | | || | ||||| || | ||||||| Sbjct 650488 AAGGCATTGATCTCC-GCATTATTGGAGATTTGGGTATGAGAAGCCTCTCTAACATTCAA 650546 Query 182693 ACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGC 182752 |||||| || | ||||| ||| |||| || | || || || | ||||| || Sbjct 650547 TGGTTTACCACGCAACGGGAAACAACCATAGTAGTCTCTTCCGACAACTGCTAGACCTGC 650606 Query 182753 AACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTG 182812 ||| || | | || ||||||||||| || | || | |||||| || | || Sbjct 650607 AACGGCCAATGCCAAGGCGGAATCACCCTCTGTCAAGATCAAAGTACATTTATAACCTTC 650666 Query 182813 TGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGTAATTTTGGACTTGCG 182872 | ||||| ||| |||| || |||| | ||| || | ||| ||| ||||||| | Sbjct 650667 TTTAGTACCTGCCATGTTGGCATCATGAAGCTTTGGCAAGTTGGTGATTCTGGACTTTCT 650726 Query 182873 AGCACCATCGGTCTTCTTGAGTTCC 182897 | |||||| |||||||||||| || Sbjct 650727 GGAACCATCTGTCTTCTTGAGTGCC 650751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031905795200