Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6 168 8e-37 seq5 105 8e-18 >seq6 Length=1133955 Score = 168 bits (186), Expect = 8e-37 Identities = 828/1301 (64%), Gaps = 45/1301 (3%) Strand=Plus/Plus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 |||||||| || || || || |||| |||||||||||| | || ||||| || ||||| Sbjct 478179 GTGTATGGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATT 478238 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || | || | ||| | | ||| | | ||| |||| |||| ||| Sbjct 478239 GGAGCAACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTTAAGAGTATCC 478298 Query 118314 CAGTCGTAG---TTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 118368 || || | | | || || ||| |||| | | |||||||| || ||| | Sbjct 478299 CAATCCCACAAATCGGAAGGCTT-TCTTCCCC----AAAGGTCAAACTGAAGCTGACCCT 478353 Query 118369 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG-GAG 118427 || ||||| || || | |||| || ||||| || || || || | || ||| Sbjct 478354 TAGAAGCTGGGGAACCTTGGAATGATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGAG 478413 Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487 | ||| | || |||||||| || || || || || || |||| | |||| ||| Sbjct 478414 AG-GACTCCAAAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCC 478472 Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547 | || || ||||| | | || | | ||||| |||| || | |||||| |||||| Sbjct 478473 TTTTCAGATTCAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCG 478532 Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAAAATT 118606 ||| ||||||| | | ||||||||| || || | ||| ||| || || || | || Sbjct 478533 AGGGCAATTGGTCTGTTTCTCATATTGGAGTTTCTAGCT-TCTGGGACTGGGTAGTAGTT 478591 Query 118607 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 118666 | || || | || || | || || ||||||||||| | |||| ||| | ||| Sbjct 478592 ACGGTCAATGATTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTC 478651 Query 118667 GTAATCAAAACTGCGAGTC---------------TCTTCATTGACATACTTAGGAAGGGC 118711 | | | || | |||| | |||| ||| | || || | || Sbjct 478652 AAAGTTATAAGTCTGAGTGGTACCATCAAGGGATTTTTCAATGAAAG-CT--GGCAATGC 478708 Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 || || |||| ||||| |||| || || |||| ||| || | ||| || Sbjct 478709 AATGGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACA 478768 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 |||||||| ||| ||| || | ||||||||||| || || | ||| |||||| || Sbjct 478769 ACACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGC 478828 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 |||||||||||||||| |||| || || ||||| || |||| | || || || | ||| Sbjct 478829 ATCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCA 478888 Query 118892 GACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 | | ||| ||||| | | || || |||| ||| ||||| || || Sbjct 478889 CAACTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAG 478948 Query 118952 GGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 119009 || | || || ||||| || | || | || |||||||| | || ||| |||| Sbjct 478949 AGCCTTGAATTCATCACCATAACAG--TCAGCAAGACCTGGTGCTTCATTTGGAGAGAAC 479006 Query 119010 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 119069 | || ||||| |||| ||||| || | |||||| | || |||||||| | || Sbjct 479007 AAAGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCT 479066 Query 119070 GAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 | ||| | ||| ||| | || | ||||| | || ||||| | | || | || Sbjct 479067 GGGAACAAATCACGAGCTCTGATC-TCTTCTTTACCGTGATTCTTTCTAATGTCGATGAA 479125 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG-- 119185 || | |||||| |||||||| ||||||| || | || | || ||| | | Sbjct 479126 ATCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTT 479185 Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245 |||| | |||| || || | |||||| |||||| ||||||| ||||||||| | ||| Sbjct 479186 ACCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACC 479245 Query 119246 ATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATG 119303 | || || || || || || || ||| || | ||||| || | |||||| Sbjct 479246 GTTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCT--GTAGCTCTAACGTTATGGATG 479303 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 || | ||| ||||| || || ||| ||||| || || | | | | | | ||| Sbjct 479304 TGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAG 479363 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || || ||||| || || | | | || | ||||| || ||||| || || Sbjct 479364 ATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGT 479423 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 || |||||||||||||| | |||||| | |||||| |||| Sbjct 479424 GGGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAA 479464 >seq5 Length=1593029 Score = 105 bits (116), Expect = 8e-18 Identities = 191/279 (68%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 167928 ATTGTTTTGCCAGTAGGTGTCTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAG 167987 |||||| ||||||||| ||| ||||| || || ||| | || || | || |||||| Sbjct 980234 ATTGTT---CCAGTAGGTACCTATGGTCGTGTTGCTCCACGTTCCGGTTTGGCCGTGAAG 980290 Query 167988 AGTGGTATCCAAGTTGGTGCGGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTC 168047 |||||| | ||||| ||||| |||||| ||||||| | |||||||| || || Sbjct 980291 CACGGTATCTCAACAGGTGCCGGTGTCGTTGATGCAGACTACAGAGGTGAAGTGAAGGTT 980350 Query 168048 GTTCTCTTCAATCACGGGCACACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 168107 ||||||||||| ||| | ||| || ||| |||| ||||| || | ||||| || Sbjct 980351 GTTCTCTTCAACCACAGTGACAAGGACTTCTCAATCGCTAAGGGTGACAGAATCGCTCAG 980410 Query 168108 CTCATCTTAGAGAGGTGCGAGACGCCCCAAGTTGAGGAAATTGGTGCGG------TTGAG 168161 ||| | || |||| | | | | | || |||| || |||| | || Sbjct 980411 CTCGTTTTGGAGAAGATTGTCAATGCTGAGATTCAGGAGATCACAGCGGAGGAGCTCGAT 980470 Query 168162 GAGACCGAGAGAGGTTCAGGTGGATTTGGTTCTACAGGT 168200 | || ||||||||| ||||||| || |||||||| ||| Sbjct 980471 AACACTGAGAGAGGTGCAGGTGGTTTCGGTTCTACTGGT 980509 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | ||| || |||||| | || | ||||| ||||| || ||| Sbjct 293550 GGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACC 293609 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||| | ||| | |||||||||||||||||| | ||| || |||||||||||||| Sbjct 293610 TGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGAT 293669 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAA 130193 || || ||| || || |||| || | |||| | || || | ||| | ||| Sbjct 293670 ACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAG-GCTTCTTCATCGGCAA 293728 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 ||| ||| ||||| | ||||| |||| ||||| || | |||| || || | || Sbjct 293729 TCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAA 293788 Query 130254 A 130254 | Sbjct 293789 A 293789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435107234720