Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6 311 1e-79 seq5 120 4e-22 >seq6 Length=1133955 Score = 311 bits (344), Expect = 1e-79 Identities = 1124/1746 (64%), Gaps = 47/1746 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| | || ||||| | || || |||||||| ||||| ||| ||| | || || Sbjct 479557 CCACAGCATTTGATCATGAGAGTCGCTATCGGTATCCATGGTAGAGATATTAAATCAGTT 479498 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| || || ||||| | || || |||| ||||| | ||||| | || Sbjct 479497 ATTGAGACTTATAACCTCATGTCTGAGAGATAC-TTCACCCACGCTTCTCCAACTTTGTT 479439 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| |||||||| ||| || || |||||| ||| |||||| | || | | || || Sbjct 479438 CAACGCTGGTACCCCACACCCACAGATGTCCTCTTGTTTCCTTGTGGCTATGAGAGAAGA 479379 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 || ||| | |||||||||| ||| | | | ||||| ||||| ||| ||||| Sbjct 479378 TTCCATCGAGGGTATCTATGAGACTTTGAAACAATGTGCCTTGATCTCCAAGACCGCTGG 479319 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||||| || | ||||||||| | || ||||| | ||| ||| || || || Sbjct 479318 TGGTATCGGTTTACACATCCATAACGTTAGAGCTACAGGCTCTTACATTGCTGGTACTAA 479259 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | ||| | ||||||||| |||| || |||||| ||| || || || || Sbjct 479258 CGGTACTTCTAACGGTTTGATTCCAATGGTTCGTGTCTTTAACAACACTGCTCGTTACGT 479199 Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTATCGCAGTC------TATCTTGAGCCATGGCA 104634 | |||| ||| | ||| || || ||| | ||| | || |||||||| Sbjct 479198 CGACCAAGGTGG---TAACAAGAGACCTGGTGCATTTGCCCTTTATTTGGAACCATGGCA 479142 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| |||||| | || ||| | || | | || || ||| | || ||| | | | Sbjct 479141 CGCAGATATCTTTGATTTCATCGACATTAGAAAGAATCACGGTAAAGAAGAGAT-CAGAG 479083 Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | || ||| | ||| | || | ||||| || ||| | |||||| | | ||||| | Sbjct 479082 CTCGTGATTTGTTCCCAGCATTGTGGATCCCTGATTTGTTCATGGAACGTGTTGAATCTA 479023 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812 ||| | ||| || | || | |||| | | ||||| ||||| | || || ||| | Sbjct 479022 ATGGTGAATGGACTTTGTTCTCTCCAAATGAAGCACCAGGTCTTGCTGACTGTTATGG-T 478964 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || || | || ||||| ||||| ||| |||||||||| | | ||| || Sbjct 478963 GATGAATTCAAGGCTCTTTATGAGAAGTATGAGAAAGAAGGTCGTGGTAGAAAGACTGTC 478904 Query 104873 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 ||| | ||||| | || || || | | || || ||||||||||| |||| | Sbjct 478903 AAGGCTCAAAAGTTGTGGTATGCAATCCTTGATGCCCAGACTGAGACTGGTACTCCATTC 478844 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 ||||||||||| || ||||||||| | |||| ||| || ||||| |||||| |||||||| Sbjct 478843 ATGCTTTACAAGGATGCCTGTAACGAGAAGACTAACCAGAAGAACTTGGGTATGATCAAG 478784 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 ||| || | ||| || || | |||| | ||| ||| || ||||| ||| Sbjct 478783 TCTTCTAACTTGTGTTGTGAGATTGTCGAATACTCTGACCCAGAAGAAGTTGCTGTTTGT 478724 Query 105053 AACCTCGCATCAATCGCTCTCCC------------CAAGTATGTGGATCCAGAGACAAAG 105100 ||| | || || || || | || || | | ||| || || Sbjct 478723 AACTTGGCCTCCATTGCATTGCCAGCTTTCATTGAAAAATCCCTTGATGGTACCACTCAG 478664 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 || | | | | |||| | || || || | || |||||| || ||| | |||||| Sbjct 478663 ACTTATAACTTTGAACGTTTGCATCAAATTGCCAAGGTTGTCACAAAGAACTTGAACAGA 478604 Query 105161 GTTATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCG 105219 | ||||| | || | ||||| || ||| ||| | || || ||||||||| || | Sbjct 478603 ATCATTGACCGTAACTACTACCCAGTCCCAGA-AGCTAGAAACTCCAATATGAGAAACAG 478545 Query 105220 TCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATT 105279 ||||||| ||||||||||| ||| | || |||| || || ||| || |||| Sbjct 478544 ACCAATTGCCCTCGGTGTTCAAGGTTTAGCTGATGCCTTTATGATTTTGCGTTTGCCATT 478485 Query 105280 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339 ||| || || | || |||||| | || | || || |||||||| |||||||| || Sbjct 478484 TGAATCTGAAAAGGCTAAGGAATTGAACATTCAGATCTTCGAGACCATTTATCACGCTGC 478425 Query 105340 TCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 | | ||| | | ||| | || || || |||||||| ||| | || | ||||| Sbjct 478424 TTTGGAGTCCTCTCTTGAGCTCGCCAAGTCCGAAGGTCCATACGAATCATTCCAAGGTTC 478365 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 105459 |||||||| | || |||||| ||||| | |||| | | || | | | Sbjct 478364 CCCAGCTTCTAAGGGTCAGCTTCAGTTTGACCTTTGGGGAAGAAAGCCTTCCGATTTGTG 478305 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 || ||||| |||| |||| || || | ||| | | ||| | | || | Sbjct 478304 GGATTGGGATACTCTTAAGGCTGATATTGTCAAGTACGGTTTGAGAAACTCTTTGCTTGT 478245 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 |||||||||||||| ||||| || | |||||||||||| | || ||||| || ||||| Sbjct 478244 TGCTCCAATGCCAACTGCCTCGACTTCTCAAATCTTGGGTTACAACGAATGTTTCGAACC 478185 Query 105580 CTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 ||||| | ||||| || ||| | | ||| || || || || |||||| ||| Sbjct 478184 ATACACTTCTAACATTTACTCT-CGTCGTGTCCTTGCTGGTGAATTCCAGATTGTTAACC 478126 Query 105639 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698 || | | ||| | || | ||| | ||| | ||||||| || || Sbjct 478125 CATATTTGCTTCGTGATTTGGTTGATTTGGGTGTTTGGGATGACTCTATGAAGAGTCACA 478066 Query 105699 T----GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAG 105754 | ||| | | ||||| |||||||| | | |||||||| ||| | || Sbjct 478065 TCATCTCTGATAAC----GGTTCTATTCAAAACTTACCAAACATTCCAAAGGAATTGAAA 478010 Query 105755 AAGTTGTACCGCACAGTTTGGGAAA----TCAAGATGAAGGATGTCATTGACATGGCCGC 105810 | |||||| || |||||||| | |||| ||| | |||| || ||||| || Sbjct 478009 GATTTGTACAAGACCGTTTGGGAGATTTCTCAA----AAGACTATCATCGATATGGCTGC 477954 Query 105811 AGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAAC 105870 ||||||| | |||||||||||| |||| | |||| | ||| | |||||| Sbjct 477953 TGATCGTGCTGCTTTCATTGATCAATCTCAATCTTTGAACATTCACATTAGAGCTCCAAC 477894 Query 105871 GATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGAT 105930 ||| ||| | | ||||||||| | ||| |||||||||||||| | || || || || Sbjct 477893 TATGGGTAAGTTGACCTCTATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTAT 477834 Query 105931 GTATTA 105936 ||| || Sbjct 477833 GTACTA 477828 >seq5 Length=1593029 Score = 120 bits (132), Expect = 4e-22 Identities = 342/520 (66%), Gaps = 7/520 (1%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTA---AAT 94497 ||||| ||||| ||| | ||| | || ||||||||| | |||||||| | | ||| Sbjct 294068 TGGACCGCTGAGGAGATTGATTTGTCTAAGGATTTGCATGATTGGAACAACAGATTGAAT 294009 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || |||||| ||||| | || || |||||||| | || || || || Sbjct 294008 GAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTATC 293949 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCC 94617 ||| |||||| | | | ||||| ||| ||||||||| | ||||| | | Sbjct 293948 GTTAATGAGAACTTGGTTGAGAACTTCTCTGCCGAGGTGCAAATTCCAGAAGCTAAGTGT 293889 Query 94618 TTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCAT 94676 ||||| | || || |||| ||| | | | || ||||||||| | | || Sbjct 293888 TTCTACG-GTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGAT 293830 Query 94677 AGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGT 94736 |||| ||||| |||||| || || | | ||| | ||||| | || | Sbjct 293829 TGACACTTATATCAAGGATCCACAACAGGCTGAGTATTTGTTTAATGCCATTGAGACTAT 293770 Query 94737 TCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTT 94795 ||| |||||| | ||||| || ||||||||| ||| ||| ||| | ||| || || Sbjct 293769 TCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGAAGAAGCCTT 293710 Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 || | |||| |||| | || ||||| |||||| |||||||||||||||||||||| Sbjct 293709 G-TTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTCCT 293651 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 | | |||||| ||| | |||||| ||||| | ||||||||| | ||||| || | Sbjct 293650 TTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAATG 293591 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || | || | ||||| || || | ||| || ||||| Sbjct 293590 AGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGC 293551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260712510880