Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 seq5 84.2 2e-11 >seq6 Length=1133955 Score = 107 bits (118), Expect = 2e-18 Identities = 446/699 (64%), Gaps = 6/699 (1%) Strand=Plus/Plus Query 79114 CACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCG 79173 ||||| ||||| |||||||| | || | |||||||||||| |||||||||||||||| Sbjct 478770 CACAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCA 478829 Query 79174 TCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAG 79233 |||||||| |||| | || || || |||||| ||| | || | | | ||| Sbjct 478830 TCCTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCAC 478889 Query 79234 ATGTCCCGGGCCCGGACAACCTTCTTGTAC--CGACCCTGTGCGACGTACGTCCGGTACA 79291 | | | ||| |||| || || ||| ||||| | | | ||| || || | Sbjct 478890 AACTTTTGAGCCTTGACAGTCT--TTCTACCACGACCTTCTTTCTCATACTTCTCATAAA 478947 Query 79292 ACTCGTTGAAAGCCTCCCCATAGACA-TCGGGCAGGCCCGGGCACTCGTGCGGGCACATC 79350 | ||||| | || ||||| ||| || | || || || || | || | | | Sbjct 478948 GAGCCTTGAATTCATCACCATA-ACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGAAC 479006 Query 79351 AGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCC 79410 | ||| || | | ||||| |||||||| | || |||||||||| || Sbjct 479007 AAAGTCCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCT 479066 Query 79411 GTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAG 79470 | ||| | || || | ||||| || | || || ||| | | |||| || Sbjct 479067 GGGAACAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAA 479126 Query 79471 TCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCG 79530 || | ||| || |||||||| || |||| ||| | ||| || | ||| | |||| Sbjct 479127 TCAAAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTA 479186 Query 79531 CCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCG 79590 || || |||| |||||| || || |||||||| || || || | ||| || | | ||| Sbjct 479187 CCACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCG 479246 Query 79591 TCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGG 79650 | | ||||| || || || | || | || | || ||| | ||| Sbjct 479247 TTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGT 479306 Query 79651 ATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATG 79710 | ||||| || || | ||||||||| || || | || | ||||| ||||| Sbjct 479307 AAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATA 479366 Query 79711 CCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTC 79770 |||||||| || || || ||||||| || ||||| || ||||||||||||| Sbjct 479367 CCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGG 479426 Query 79771 GTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 ||||| |||||||| | || || | ||||| |||||| Sbjct 479427 GTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAG 479465 Score = 104 bits (114), Expect = 3e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 |||| |||||||||||| || ||||| | |||||||||||| ||||| | ||||||| Sbjct 477819 GTTCTCAAATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAG 477878 Query 78250 GACAGCTTGGCCAGACTCGG-GTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | || ||| ||| | | || | ||| ||| ||||| | || || || || || || Sbjct 477879 GTCAACTTACCCATAGTTGGAGCTCT-AATGTGAATGTTCAAAGATTGAGATTGATCAAT 477937 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 | | ||| | || || || ||||| ||||||| | |||||| | ||||||||| | ||| Sbjct 477938 GAAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCCAAACGGT 477997 Query 78369 C 78369 | Sbjct 477998 C 477998 >seq5 Length=1593029 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||||||||| || ||||| | || || || ||||| || || || || | || || | Sbjct 214493 ACGGTATCGTACCTATGCTTAGAGTGTTTAATAACACTGCAAGATATGTTGATCAAGGTG 214434 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | || | || | || |||||||| | || |||||||| || || || |||| Sbjct 214433 GTAATAAGAGACCAGGTGCATTTGCCATCTATTTGGAACCATGGCATGCTGATGTGATGG 214374 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 ||||| | | | | ||| || || | || |||||| | ||| || | ||| Sbjct 214373 ATTTCTTAAACTTAAGGAAGAATCATGGAAAGGAAGAGATGAGAGCTCGTGATTTGTTCT 214314 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGG 19648 || | ||||| || || ||||||||||| || |||||||| || ||||||||| Sbjct 214313 ATGCTCTATGGATCCCAGATCTATTCATGGAAAAAGTTGAGAAAGATGAAGAATGG 214258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524717721280