Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 159 4e-34
seq7 136 5e-27
seq6 134 2e-26
seq4 132 5e-26
>seq1
Length=3147266
Score = 159 bits (176), Expect = 4e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| | ||||| ||||||||||| ||||||||||||||
Sbjct 843016 ATGCAAATTTTCGTGAAGACCTTGACCGGTAAGACTATTACACTTGAGGTTGAGTCTTCC 843075
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| | || ||||||||||||||||| || || || ||||||
Sbjct 843076 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAG 843135
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || || || |||||||| ||||| |||| | ||||| | ||||| ||
Sbjct 843136 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 843195
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
|||| ||||| |||||||||||
Sbjct 843196 ATCCAGAAGGAGTCCACTCTTCA 843218
Score = 159 bits (176), Expect = 4e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| | || || ||||||||||| || |||||||| || |
Sbjct 843472 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 843531
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| |||| ||||| |||||||| || ||||| || ||||||
Sbjct 843532 GACACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 843591
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||||||||| || ||||||| | | ||| | | ||||| ||
Sbjct 843592 CAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAAC 843651
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| || ||||| |||||||||||
Sbjct 843652 ATTCAGAAGGAGTCCACTCTTCA 843674
Score = 141 bits (156), Expect = 1e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| | || || ||||||||||| || |||||||||||
Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||| |||| || |||||||||||||| || || || ||||||
Sbjct 843304 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 843363
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| |||||||| || || |||| | | ||||| | ||||| ||
Sbjct 843364 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 843423
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| || ||||| || || |||||
Sbjct 843424 ATTCAGAAGGAGTCAACCCTTCA 843446
Score = 113 bits (124), Expect = 5e-20
Identities = 125/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511
|||||||||| || | |||| || | ||| | || ||||||||||||||||| |
Sbjct 842834 AGGTTGAGTCCTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTA 842893
Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571
| || || || |||||| | || || ||||| |||||||| || ||||||| | | ||||
Sbjct 842894 TCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCC 842953
Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| | ||||| || | || ||||| ||||||||||| | ||||||
Sbjct 842954 TTTCCGACTACAACATTCAGAAGGAGTCCACTCTTCACTTGGTCTTG 843000
>seq7
Length=431226
Score = 136 bits (150), Expect = 5e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || || ||||| || ||| | |||||||||||
Sbjct 274918 ATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCC 274977
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || |||||||| || || || || || ||||||
Sbjct 274978 GACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAG 275037
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| |||||||| || ||||||| | | ||||| | ||||| ||
Sbjct 275038 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAAC 275097
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| || ||||| ||||| |||||
Sbjct 275098 ATTCAGAAGGAGTCCACCCTTCA 275120
>seq6
Length=1133955
Score = 134 bits (148), Expect = 2e-26
Identities = 535/837 (64%), Gaps = 15/837 (2%)
Strand=Plus/Plus
Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966
||| |||| || || || || || ||||| | || | | ||||| || || ||
Sbjct 478712 GGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACA 478771
Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026
||| ||||||||||| || |||||| ||| |||||||| | ||| |||| || || ||
Sbjct 478772 CAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATC 478831
Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086
|||||| |||| | || ||||| ||||| ||| | | ||||| || | ||| |
Sbjct 478832 CTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAA 478891
Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146
|| | |||||||| ||| | ||||| | ||||||| | ||| |
Sbjct 478892 CTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGC 478951
Query 81147 GTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTG 81206
| ||| | |||| | | |||| || |||| || || || | | ||
Sbjct 478952 CTTGAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGT 479011
Query 81207 CCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAA 81266
||| || | || ||| | |||||| ||||||||||| | || | |||
Sbjct 479012 CCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAA 479071
Query 81267 CAGGTCGCGGCAGCGCGC--CTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCC 81324
|| || || ||| | ||| || | ||| || || | | |||| || ||
Sbjct 479072 CAAATCACG--AGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCA 479129
Query 81325 ATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC------CTTGCGACGG 81378
| ||| || || |||||||| |||| ||| | ||| | | || |||| ||
Sbjct 479130 AAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTAC-- 479187
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
|||| |||| ||||||||| ||||| |||||| ||||| | ||| || || | |||
Sbjct 479188 -CACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCG 479246
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497
| || |||||| ||||| | || || || | || | || || ||| ||
Sbjct 479247 TTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGT 479306
Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557
|| |||||| ||||| | ||| || ||| ||||| | |||| |||||||| ||
Sbjct 479307 AA-ACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGAT 479365
Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617
||||||||| ||||| | |||| | | | |||||| |||||||| ||| |
Sbjct 479366 ACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGG 479425
Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677
| || || ||||||| ||||| | ||||| |||| || | | ||||| ||||
Sbjct 479426 GGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTT 479485
Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCAT 81734
||| || || | || | |||||| ||| || ||||||||||| || | |||
Sbjct 479486 ATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCAT 479542
Score = 107 bits (118), Expect = 2e-18
Identities = 139/187 (74%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || | || ||||||||| || ||||| | ||||||||||| ||||| | ||||
Sbjct 477813 GCCTGGGTTCTCAAATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGC 477872
Query 80092 ATAGAACTGAGCTT-CGCA-AGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACT 80149
||||| | | ||| | || ||| ||| | ||| ||| ||||||| ||| ||||| |
Sbjct 477873 ATAGAGGTCAACTTACCCATAGT-TGGAGCTCT-AATGTGAATGTTCAAAGATTGAGATT 477930
Query 80150 GACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCC 80209
|| |||||||| ||||||| || ||||| || || || | |||||| | ||| ||||
Sbjct 477931 GATCAATGAAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCC 477990
Query 80210 ATACTGT 80216
| || ||
Sbjct 477991 AAACGGT 477997
>seq4
Length=1873953
Score = 132 bits (146), Expect = 5e-26
Identities = 150/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || ||||| | ||||| ||||| ||||| | ||||||||||| ||| | ||||
Sbjct 1428223 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 1428282
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| || || || ||||||||| | ||
Sbjct 1428283 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTT 1428342
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || || |||||||| |||||||| | | | ||||| | ||||| || |||| |||
Sbjct 1428343 ATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAAG 1428402
Query 27595 GAATCCACTCTTCATCTAGTC 27615
|| |||||| | ||| | |||
Sbjct 1428403 GAGTCCACTTTGCATTTGGTC 1428423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310314453440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |