Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 159 4e-34 seq7 136 5e-27 seq6 134 2e-26 seq4 132 5e-26 >seq1 Length=3147266 Score = 159 bits (176), Expect = 4e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| | ||||| ||||||||||| |||||||||||||| Sbjct 843016 ATGCAAATTTTCGTGAAGACCTTGACCGGTAAGACTATTACACTTGAGGTTGAGTCTTCC 843075 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || ||||||||||||||||| || || || |||||| Sbjct 843076 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAG 843135 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || || |||||||| ||||| |||| | ||||| | ||||| || Sbjct 843136 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 843195 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| ||||||||||| Sbjct 843196 ATCCAGAAGGAGTCCACTCTTCA 843218 Score = 159 bits (176), Expect = 4e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || || ||||||||||| || |||||||| || | Sbjct 843472 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 843531 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| |||| ||||| |||||||| || ||||| || |||||| Sbjct 843532 GACACTATTGACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAG 843591 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||||||||| || ||||||| | | ||| | | ||||| || Sbjct 843592 CAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACCTTGTCCGACTACAAC 843651 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| ||||||||||| Sbjct 843652 ATTCAGAAGGAGTCCACTCTTCA 843674 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| | || || ||||||||||| || ||||||||||| Sbjct 843244 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCC 843303 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||| |||| || |||||||||||||| || || || |||||| Sbjct 843304 GATACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 843363 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| |||||||| || || |||| | | ||||| | ||||| || Sbjct 843364 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAAC 843423 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| || || ||||| Sbjct 843424 ATTCAGAAGGAGTCAACCCTTCA 843446 Score = 113 bits (124), Expect = 5e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511 |||||||||| || | |||| || | ||| | || ||||||||||||||||| | Sbjct 842834 AGGTTGAGTCCTCCGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTA 842893 Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571 | || || || |||||| | || || ||||| |||||||| || ||||||| | | |||| Sbjct 842894 TCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCC 842953 Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | | ||||| || | || ||||| ||||||||||| | |||||| Sbjct 842954 TTTCCGACTACAACATTCAGAAGGAGTCCACTCTTCACTTGGTCTTG 843000 >seq7 Length=431226 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || || ||||| || ||| | ||||||||||| Sbjct 274918 ATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCC 274977 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || || |||||||| || || || || || |||||| Sbjct 274978 GACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAG 275037 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| |||||||| || ||||||| | | ||||| | ||||| || Sbjct 275038 CAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAAC 275097 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| ||||| ||||| Sbjct 275098 ATTCAGAAGGAGTCCACCCTTCA 275120 >seq6 Length=1133955 Score = 134 bits (148), Expect = 2e-26 Identities = 535/837 (64%), Gaps = 15/837 (2%) Strand=Plus/Plus Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966 ||| |||| || || || || || ||||| | || | | ||||| || || || Sbjct 478712 GGAGGCCAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACA 478771 Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026 ||| ||||||||||| || |||||| ||| |||||||| | ||| |||| || || || Sbjct 478772 CAAGTTAGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATC 478831 Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086 |||||| |||| | || ||||| ||||| ||| | | ||||| || | ||| | Sbjct 478832 CTTGTAAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAA 478891 Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146 || | |||||||| ||| | ||||| | ||||||| | ||| | Sbjct 478892 CTTTTGAGCCTTGACAGTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGC 478951 Query 81147 GTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTG 81206 | ||| | |||| | | |||| || |||| || || || | | || Sbjct 478952 CTTGAATTCATCACCATAACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGT 479011 Query 81207 CCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAA 81266 ||| || | || ||| | |||||| ||||||||||| | || | ||| Sbjct 479012 CCATTCACCATTAGATTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAA 479071 Query 81267 CAGGTCGCGGCAGCGCGC--CTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCC 81324 || || || ||| | ||| || | ||| || || | | |||| || || Sbjct 479072 CAAATCACG--AGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCA 479129 Query 81325 ATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC------CTTGCGACGG 81378 | ||| || || |||||||| |||| ||| | ||| | | || |||| || Sbjct 479130 AAGATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTAC-- 479187 Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438 |||| |||| ||||||||| ||||| |||||| ||||| | ||| || || | ||| Sbjct 479188 -CACCTTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCG 479246 Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497 | || |||||| ||||| | || || || | || | || || ||| || Sbjct 479247 TTAGAAGTACCGTTAGTACCAGCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGT 479306 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 || |||||| ||||| | ||| || ||| ||||| | |||| |||||||| || Sbjct 479307 AA-ACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGAT 479365 Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617 ||||||||| ||||| | |||| | | | |||||| |||||||| ||| | Sbjct 479366 ACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGG 479425 Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677 | || || ||||||| ||||| | ||||| |||| || | | ||||| |||| Sbjct 479426 GGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTT 479485 Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCAT 81734 ||| || || | || | |||||| ||| || ||||||||||| || | ||| Sbjct 479486 ATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCGACTCTCAT 479542 Score = 107 bits (118), Expect = 2e-18 Identities = 139/187 (74%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || | || ||||||||| || ||||| | ||||||||||| ||||| | |||| Sbjct 477813 GCCTGGGTTCTCAAATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGC 477872 Query 80092 ATAGAACTGAGCTT-CGCA-AGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACT 80149 ||||| | | ||| | || ||| ||| | ||| ||| ||||||| ||| ||||| | Sbjct 477873 ATAGAGGTCAACTTACCCATAGT-TGGAGCTCT-AATGTGAATGTTCAAAGATTGAGATT 477930 Query 80150 GACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCC 80209 || |||||||| ||||||| || ||||| || || || | |||||| | ||| |||| Sbjct 477931 GATCAATGAAAGCAGCACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCC 477990 Query 80210 ATACTGT 80216 | || || Sbjct 477991 AAACGGT 477997 >seq4 Length=1873953 Score = 132 bits (146), Expect = 5e-26 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| | ||||| ||||| ||||| | ||||||||||| ||| | |||| Sbjct 1428223 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 1428282 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| || || || ||||||||| | || Sbjct 1428283 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACTT 1428342 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || || |||||||| |||||||| | | | ||||| | ||||| || |||| ||| Sbjct 1428343 ATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAAG 1428402 Query 27595 GAATCCACTCTTCATCTAGTC 27615 || |||||| | ||| | ||| Sbjct 1428403 GAGTCCACTTTGCATTTGGTC 1428423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310314453440