Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 5e-17
seq4 96.9 2e-15
seq7 89.7 3e-13
>seq1
Length=3147266
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || || || |||||| |||||||| || || ||
Sbjct 843470 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAG 843411
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | |||||||| || ||||||||||| || | | ||| ||||| || ||
Sbjct 843410 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 843351
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | |||||| | ||| || || | ||| ||
Sbjct 843350 ATACCCTCCTTGTCCTGGATC-TTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAAC 843292
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || || ||||| || || || ||||| ||||| |||||
Sbjct 843291 CTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || |||||| |||||| |||||||| || || |||
Sbjct 843014 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAA 842955
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | || ||||| || ||||||||||| || | | ||| || || |||||
Sbjct 842954 AGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGG 842895
Query 34600 ACTCCCTCCTTGTC 34613
| |||||||||||
Sbjct 842894 ATACCCTCCTTGTC 842881
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || |||||| |||||| || ||||| || || ||
Sbjct 843242 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 843183
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | ||||| || || |||||||| || || | | ||| ||||| || ||
Sbjct 843182 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 843123
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||| || | || ||| | ||| ||||| ||| ||
Sbjct 843122 ATACCCTCCTTGTC-CTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAAC 843064
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || || |||||||| || || ||||| ||||| |||||
Sbjct 843063 CTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016
>seq4
Length=1873953
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| | |||| |||||| || ||||| || || ||||| |||| |||| ||
Sbjct 1428422 ACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCCTCG 1428363
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || |||||||| || || | | ||| ||||| || || | ||||||||||| |
Sbjct 1428362 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGG 1428303
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
||| || | || ||| | ||| ||||| | ||| || |||| ||| || || ||
Sbjct 1428302 ATC-TTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTT 1428244
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCA 34705
|||||| || || || || ||| |||||
Sbjct 1428243 ACCGGTCAAGGTCTTAACGAAA--CTGCA 1428217
>seq7
Length=431226
Score = 89.7 bits (98), Expect = 3e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||| || || ||| |||||| |||||||| || || ||||| |||| | || ||
Sbjct 275127 CACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACCATCCTC 275068
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
||| || ||||||||||| || | | ||| ||||| || || | || || |||||
Sbjct 275067 AAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTG 275008
Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|||| || | || || | ||| ||||| ||| || |||| || || || |
Sbjct 275007 GATC-TTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCT 274949
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATT 34713
|||| || | || || ||||| |||||||| ||| ||
Sbjct 274948 TACCCGTGAGGGTCTTAACAAAGATCTGCATCTTGGTT 274911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729553970796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |