Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7 165 2e-35 seq1 161 2e-34 seq4 149 1e-30 >seq7 Length=431226 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | |||||| |||||||| || || ||||| || || | |||||| || || Sbjct 275133 TCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACC 275074 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || |||||||| || || |||||||| | || |||||||| || | ||||| || Sbjct 275073 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTT 275014 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||||||| || || || || || ||||| || |||||||| | |||||| Sbjct 275013 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGAT 274954 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| |||||||| ||||| ||||| | |||||| || Sbjct 274953 GGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 274915 >seq1 Length=3147266 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||||||||||||| || || ||||| || || | | ||| || ||||| || ||||| Sbjct 843675 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAGGTTCTACCATCCTCAAGCTG 843616 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || |||||||| | || |||||||| |||| ||||||||||| || ||||| Sbjct 843615 CTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTT 843556 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| || || ||||||||| |||||||||||| || || ||||| || || Sbjct 843555 AGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAATAGTCTTACCAGT 843496 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| | |||||| Sbjct 843495 CAAGGTCTTGACAAAGATCTGCAT 843472 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||||||||||||| || |||||||| || || | ||||| || |||||||| ||||| Sbjct 843219 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTG 843160 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||||||||| | || |||||||| || | || ||||||||||| ||||| Sbjct 843159 CTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGAATCTT 843100 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| || |||||||| || |||||||| || || || ||||| || || Sbjct 843099 GGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGTGTAATAGTCTTACCGGT 843040 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||||| || || | ||||| Sbjct 843039 CAAGGTCTTCACGAAAATTTGCAT 843016 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || ||||| || || ||||| || || | ||||| || |||||||| ||||| Sbjct 843447 GTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAAGCTG 843388 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || |||||||| | || |||||||| || | || ||||||||||||||||| Sbjct 843387 CTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTT 843328 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| || || || || ||| ||||||||||| || || ||||| || || Sbjct 843327 AGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGTCTTACCAGT 843268 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||||| || || | ||||| Sbjct 843267 CAAGGTCTTCACGAAAATTTGCAT 843244 Score = 123 bits (136), Expect = 6e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||||||||||||||| || || ||||| || || | |||||| || || Sbjct 843003 TCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCTACC 842944 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || |||||||| || || |||||||| | || || ||||| || | || ||||| Sbjct 842943 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTT 842884 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 |||||| ||||| || ||||| || || ||||| ||| ||||||| || Sbjct 842883 GTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACCTAGA 842831 >seq4 Length=1873953 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| ||||| | || | ||||||||| || |||||||| || || | |||||| || || Sbjct 1428429 TCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 1428370 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 || || |||||||| || ||||||||||| | || |||||||| || | || ||||| Sbjct 1428369 GTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 1428310 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||||||| || ||||| || |||||||||||| |||||||| | || || Sbjct 1428309 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 1428250 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | ||||| || || Sbjct 1428249 GGTCTTACCGGTCAAGGTCTTAACGAA 1428223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151821780380