Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq7 165 2e-35
seq1 161 2e-34
seq4 149 1e-30
>seq7
Length=431226
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || | |||||| |||||||| || || ||||| || || | |||||| || ||
Sbjct 275133 TCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACC 275074
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| || |||||||| || || |||||||| | || |||||||| || | ||||| ||
Sbjct 275073 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTT 275014
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||| || || || || || ||||| || |||||||| | ||||||
Sbjct 275013 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGAT 274954
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| |||||||| ||||| ||||| | |||||| ||
Sbjct 274953 GGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 274915
>seq1
Length=3147266
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || || ||||| || || | | ||| || ||||| || |||||
Sbjct 843675 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAGGTTCTACCATCCTCAAGCTG 843616
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || |||||||| | || |||||||| |||| ||||||||||| || |||||
Sbjct 843615 CTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTT 843556
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || ||||||||| |||||||||||| || || ||||| || ||
Sbjct 843555 AGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAATAGTCTTACCAGT 843496
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| ||||| ||||| | ||||||
Sbjct 843495 CAAGGTCTTGACAAAGATCTGCAT 843472
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||||||||| || |||||||| || || | ||||| || |||||||| |||||
Sbjct 843219 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTG 843160
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || ||||||||||| | || |||||||| || | || ||||||||||| |||||
Sbjct 843159 CTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGAATCTT 843100
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || |||||||| || |||||||| || || || ||||| || ||
Sbjct 843099 GGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGTGTAATAGTCTTACCGGT 843040
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| ||||| || || | |||||
Sbjct 843039 CAAGGTCTTCACGAAAATTTGCAT 843016
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| || ||||| || || ||||| || || | ||||| || |||||||| |||||
Sbjct 843447 GTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAAGCTG 843388
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || |||||||| | || |||||||| || | || |||||||||||||||||
Sbjct 843387 CTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTT 843328
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || || || ||| ||||||||||| || || ||||| || ||
Sbjct 843327 AGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGTCTTACCAGT 843268
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| ||||| || || | |||||
Sbjct 843267 CAAGGTCTTCACGAAAATTTGCAT 843244
Score = 123 bits (136), Expect = 6e-23
Identities = 131/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||||||||||||| || || ||||| || || | |||||| || ||
Sbjct 843003 TCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCTACC 842944
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| || |||||||| || || |||||||| | || || ||||| || | || |||||
Sbjct 842943 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTT 842884
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071
|||||| ||||| || ||||| || || ||||| ||| ||||||| ||
Sbjct 842883 GTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACCTAGA 842831
>seq4
Length=1873953
Score = 149 bits (164), Expect = 1e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| ||||| | || | ||||||||| || |||||||| || || | |||||| || ||
Sbjct 1428429 TCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 1428370
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|| || |||||||| || ||||||||||| | || |||||||| || | || |||||
Sbjct 1428369 GTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 1428310
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||| || ||||| || |||||||||||| |||||||| | || ||
Sbjct 1428309 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 1428250
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | ||||| || ||
Sbjct 1428249 GGTCTTACCGGTCAAGGTCTTAACGAA 1428223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151821780380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |