Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 147 5e-30 seq4 125 2e-23 >seq1 Length=3147266 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| |||||||| || || || | ||||| |||| ||| ||||| || Sbjct 843687 TCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAGGTTCTACC 843628 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || |||||||| ||||| |||||||||| || ||||| || |||||||||||||| Sbjct 843627 ATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTT 843568 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| || || || ||||| |||| ||| || || | || || Sbjct 843567 GTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAAT 843508 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || ||||| || || Sbjct 843507 AGTCTTACCAGTCAAGGTCTT 843487 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| |||||||| || || |||| ||||| |||| | ||||| || Sbjct 843231 TCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCC 843172 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| |||||||| || ||||||||||||| || ||||| || || ||||| ||||| Sbjct 843171 ATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 843112 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || ||||| ||| || || |||||||| || | || || || | || || Sbjct 843111 GTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGTGTAAT 843052 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || || | ||| | |||||| Sbjct 843051 AGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016 >seq4 Length=1873953 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | || | |||||| || || |||| ||||| || | | ||||| || Sbjct 1428429 TCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 1428370 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 || || |||||||| || ||||||||||||| || ||||| || || ||||| ||||| Sbjct 1428369 GTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 1428310 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| |||||||| ||| || || |||||||| |||| || || || || || || Sbjct 1428309 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 1428250 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || ||||| || || | ||| Sbjct 1428249 GGTCTTACCGGTCAAGGTCTTAACGAA 1428223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531016648328