Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq6 356 3e-93 seq5 192 8e-44 >seq6 Length=1133955 Score = 356 bits (394), Expect = 3e-93 Identities = 1382/2150 (64%), Gaps = 60/2150 (3%) Strand=Plus/Plus Query 76778 CAAT-GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 |||| || |||||||| | || ||| || | | || | | ||||||||||||||| | Sbjct 477784 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 477843 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | |||| |||| |||||||| ||||| |||| || | | ||| | Sbjct 477844 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 477903 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || ||||| |||| || ||| |||||| |||||||| | | |||||| ||||| | Sbjct 477904 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 477963 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 || || |||||||||| ||| ||||||| || ||| | | | ||| | || | || Sbjct 477964 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTTTG 478023 Query 77017 GAAGGTTTG-TA--TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCAT 77073 ||| ||||| || |||||||| ||||| ||| || || || | |||| ||| | Sbjct 478024 GAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAGT 478083 Query 77074 CATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATT 77133 ||| ||| | | || ||| | | ||| | || || ||||| || || |||| Sbjct 478084 CATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAATT 478143 Query 77134 CTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 77193 | |||| | || | ||||| |||||| ||| || |||||||| | | |||| |||| Sbjct 478144 CACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTGT 478203 Query 77194 TTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGA 77253 ||||| ||||||| ||| || ||||||||||| || || || | ||| ||||| | Sbjct 478204 AACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTCA 478263 Query 77254 GACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGG--TAC 77311 ||| | | || | | | || ||| | ||||||||| | ||| ||||| | | Sbjct 478264 AACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTTC 478323 Query 77312 AACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTC 77371 | ||||||| || | || || || ||| ||| || || | ||| ||| Sbjct 478324 TTC--CCCAAAGGTCAAACTGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATTC 478381 Query 77372 ATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGT 77431 || || ||||| | | || || ||| | | ||||| || ||| |||||| || Sbjct 478382 GTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGGT 478441 Query 77432 TTCGAAAATCTTCTTATTGAGATCTTGTGC---TTCA-ATACTATCAAACGGATAATGTA 77487 ||||| |||| | || | || | || |||| || ||||| || || | | Sbjct 478442 CTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGAT----TCAAATGGCAAACGCA 478497 Query 77488 AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 77547 ||| ||||||||||| ||||| || ||||| || | |||| ||||| | |||| ||| Sbjct 478498 AAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATAT 478557 Query 77548 TGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATT---GAGAT 77604 |||| || |||||||||| | || || || ||| ||| || ||| | || | | Sbjct 478558 TGGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCT 478617 Query 77605 TTCTAACAAC-----TACTTTAA---CCACGTCC------TTTAGTTTAAG----AAAAT 77646 || | ||||| | ||| | |||| | | ||| | || | || Sbjct 478618 TTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCAT 478677 Query 77647 CAA---ATCTTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTG 77703 ||| || || || | ||| || ||| || || || || | |||||||| | Sbjct 478678 CAAGGGATTTTTCA-----ATGAAAGCTG-GCAATGCAATGGAGGCCAAGTTACAAACAG 478731 Query 77704 CTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAG 77763 | || || | | || | |||| | ||||| ||| | ||| | | ||||| Sbjct 478732 CAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCA 478791 Query 77764 TGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAG 77823 | |||| || | ||||| |||| | || || | ||||| ||||| || || |||| Sbjct 478792 TACCCAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAG 478851 Query 77824 TCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCAT 77881 | || || ||| |||| | || | || | | || || ||| | ||| || | || Sbjct 478852 TACCAGTCTCAGTCTGGGCATCAAGGATTGCATACC--ACAACTTTTGAGCCTTGA-CA- 478907 Query 77882 AGATTTGTA--TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCC 77939 ||| || || | ||| | ||||| | ||| || | |||||||| || Sbjct 478908 GTCTTTCTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTTGAATTCATCACCA 478967 Query 77940 CAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCC 77999 || ||| | | || || ||||||||| | | ||| | ||| ||||||| Sbjct 478968 TAACAGTCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGAT 479027 Query 78000 TTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTA 78059 | ||| |||| ||| || | |||||| ||||| | || || | ||| || | ||| Sbjct 479028 TCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTG 479087 Query 78060 TGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCAT 78119 ||||| || || ||||||| ||| |||| || || | ||||| | |||||| Sbjct 479088 ATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCAT 479147 Query 78120 GGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 ||||| | ||| | || | | ||||||| || ||||| || || || | || | Sbjct 479148 GGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGA 479207 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || ||||| ||| | || | | ||||||||| | ||||||||| || || || || ||| Sbjct 479208 GCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCA 479267 Query 78240 GAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATC 78299 | ||| ||| || | || | || ||| ||| || || || || || || || Sbjct 479268 GCAATGTAAGAGCCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTC 479327 Query 78300 TTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATC 78359 || || || | || || ||||||| || || ||||||||||| || || || || Sbjct 479328 TTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTC 479387 Query 78360 ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTC 78419 || | ||| ||||| ||||| || | || || || || || || || || Sbjct 479388 ATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTT 479447 Query 78420 GGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCT 78479 ||||| || || || || || | ||||| | || || || || |||||| |||||| Sbjct 479448 GGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTA 479507 Query 78480 ATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACC 78539 || || | ||| || || | || || | ||| | || |||||| || | |||| | Sbjct 479508 ATATCTCTACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCG 479567 Query 78540 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 78599 ||| ||| | ||||||||| ||| | ||||| || || |||||||| ||||| Sbjct 479568 ACTTTACCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTA 479627 Query 78600 TA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAA 78657 || ||||| ||||| ||||| || || |||| | | | |||||| | | || Sbjct 479628 TAGTTGAAA--TCTCTATCGTAGATGATGGCAGAGTCCAACTCGTCTTTGAACTCTTGAA 479685 Query 78658 CAATATCCATGACAGTAGTT-GAAATAATAGGAGATCGTACACCATTTTTAGGATTAACA 78716 |||| | ||| | | || || | || ||||| | | | | | || || |||| Sbjct 479686 CAATGT-CATAAGTTTCCTTAGACAACATCGGAGAATGGAGATCGGTCTTTGGGTTAATG 479744 Query 78717 TAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTA 78776 ||||| | | ||||| | ||| | || |||| | |||| ||| || | |||| Sbjct 479745 TAGTTGTAAAGCTCTTCGACAACAGAAGAGAACTGTTTAGTGGTTTGCTTATGCAAATTA 479804 Query 78777 GATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCT 78836 || | || ||||| ||||||| | ||||||| || ||||| ||||| | || Sbjct 479805 GAGATGGCAATTCTAGCAGCTAAAGTAGCATAGTCTGGATGAACAGTAGTCATATAAGCA 479864 Query 78837 GCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || || |||| ||||| ||||| ||||| || | ||| Sbjct 479865 CAAGTCTCAGCAGCCAAGTTATCCAACTCGATAGTGGTGACACCTTCATA 479914 >seq5 Length=1593029 Score = 192 bits (212), Expect = 8e-44 Identities = 347/496 (70%), Gaps = 10/496 (2%) Strand=Plus/Plus Query 77757 TTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATA 77816 ||||| || |||| ||| | || || |||||| |||| || | |||||||| || || Sbjct 214031 TTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCATG 214090 Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTT 77874 || ||| || ||||||| || || || | || || | ||| | ||| || ||| | Sbjct 214091 AAAGGACCACCAGTTTCAACTTGAGACTCCAAGATTGAGTGCCATA--ACTTCTGAGCCT 214148 Query 77875 TTATCATAGA-TTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCA 77933 | ||| | |||| ||| || | ||||||| ||| || | ||||| || Sbjct 214149 TAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATTTGTGATACAGTTGAACAAATGCA 214207 Query 77934 TCTCCCCAAACATCATCCAATCCAGG-GCATTCATTTGGGCACATCAATGACCAGTCACC 77992 || || | | |||| ||| ||||| |||| ||| ||| | | ||| |||| || | Sbjct 214208 TCACCATACATCTCATTCAAACCAGGAGCAT-CATCTGGACTAAACAAGCACCATTCTTC 214266 Query 77993 ATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 ||||| || |||| || ||| || ||||| || |||||||||||| || | ||| || Sbjct 214267 ATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAGAACAAATCACG 214326 Query 78053 GGTTCTATGTTCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATCAG 78111 | ||| ||||| ||||| |||||| ||||| | ||||| ||||| | ||||| Sbjct 214327 AGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAA-TCCATCACATCAG 214385 Query 78112 AATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTA 78171 |||||||||||| | ||| || || | | || |||| |||||||| || ||||| | Sbjct 214386 CATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAA 214445 Query 78172 TATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCAT 78231 |||||| || ||||||||| | ||||| | ||| || | |||||||| || || |||| Sbjct 214446 CATATCTTGCAGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCAT 214505 Query 78232 TTGTTCCAGAAATATA 78247 ||| ||| | ||| || Sbjct 214506 TTGATCCGGCAATGTA 214521 Score = 179 bits (198), Expect = 5e-40 Identities = 404/606 (67%), Gaps = 6/606 (1%) Strand=Plus/Plus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||| ||||| ||||| ||||| ||| || | ||||||||| | | ||| || Sbjct 293529 CAAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAA 293588 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 || ||||| || || | ||| ||||| | || | || || | ||| || || | || Sbjct 293589 CTCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGC 293648 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301 || || ||||| ||||| || ||||| || || ||||| || ||||||||| ||| | Sbjct 293649 AAAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAA 293708 Query 48302 ACTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 |||||| | | ||||| | |||||||||||||||||||| | ||| || Sbjct 293709 CAAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGG 293768 Query 48359 CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATC 48418 || || || || |||||||| | | | | | | ||| || | ||||| || Sbjct 293769 AATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTC 293828 Query 48419 TATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAA 48478 || || ||| || | || |||||||| || || || || || || ||||| || Sbjct 293829 AATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAA 293888 Query 48479 ACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTAC 48538 ||| | ||||||| || || ||||| | | | || ||| |||| |||||||| || Sbjct 293889 ACACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAAC 293948 Query 48539 TATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGA 48598 || || ||| ||| ||||| || || | ||| | || || | ||| || Sbjct 293949 GATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTC 294008 Query 48599 AGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 48655 | ||| | || ||||| |||| | ||| || || | ||| | || ||||| ||||| Sbjct 294009 ATTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCA 294068 Query 48656 AAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAAT 48715 || || || || || || || || | ||| || ||| ||| | ||||||||||| Sbjct 294069 GAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAAG 294128 Query 48716 AACAAA 48721 |||||| Sbjct 294129 AACAAA 294134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668695799680