Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 141 2e-28 seq7 120 7e-22 seq4 104 5e-17 >seq1 Length=3147266 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || ||||||||||| |||| | ||||| |||||||| | Sbjct 843222 CAAG-TGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGA 843164 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || |||||||||||||| ||||||||||| | | ||| || ||||| || |||| Sbjct 843163 GCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGAA 843104 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | |||| ||| ||| || ||||| |||||||| || | Sbjct 843103 TCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGTGTAATAGTCTTAC 843044 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||||||||| | ||||| Sbjct 843043 CGGTCAAGGTCTTCACGAAAATTTGCAT 843016 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || || |||||||| |||| || ||||| ||||| || | Sbjct 843678 CAAG-TGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAGGTTCTACCATCCTCAA 843620 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || |||||||| ||||||||||| | | || |||||||| ||||||| Sbjct 843619 GCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAA 843560 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | |||| || || || || || |||||||| || | Sbjct 843559 TCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAATAGTCTTAC 843500 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| || |||| |||||| Sbjct 843499 CAGTCAAGGTCTTGACAAAGATCTGCAT 843472 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || || |||||||| |||| | ||||| |||||||| | Sbjct 843450 CAAG-TGAAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAA 843392 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| |||||||| ||||||||||| | | ||| || ||||| || || | Sbjct 843391 GCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 843332 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | || || ||| || || || |||||||| || | Sbjct 843331 TCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGTCTTAC 843272 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||||||||| | ||||| Sbjct 843271 CAGTCAAGGTCTTCACGAAAATTTGCAT 843244 >seq7 Length=431226 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||||| || ||||| || || |||||||| || | | ||||| || Sbjct 275133 TCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACC 275074 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || || ||||| |||||||| ||||||||||| | | ||| ||||| || Sbjct 275073 ATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTT 275014 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || |||||| | || | |||| ||| ||| || || | ||| || Sbjct 275013 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGAT 274954 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || |||||||| ||||| || |||| |||||| || Sbjct 274953 GGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 274915 >seq4 Length=1873953 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||||||||| | ||| | ||| ||||| || ||||||||||| || | | ||||| || Sbjct 1428429 TCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACC 1428370 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 || || || || |||||||||||||| ||||||||||| | | ||| || ||||| Sbjct 1428369 GTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTT 1428310 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || ||||| | || | | |||| || ||| || || | ||||| Sbjct 1428309 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAAT 1428250 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAA 152095 || || || || | ||||| ||||| Sbjct 1428249 GGTCTTACCGGTCAAGGTCTTAACGAA 1428223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820622600052