Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq7 138 2e-27 seq1 136 8e-27 seq4 134 3e-26 >seq7 Length=431226 Score = 138 bits (152), Expect = 2e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||||| ||| || | |||||||| || || || ||||||||| Sbjct 275108 TCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAG 275049 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | || |||||| || ||||| || ||||| |||||||| | || || | Sbjct 275048 ATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTGGATCTTGGACTTGACATTG 274989 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || |||||||| |||| || || || | |||||| ||||||||||| | |||||||| Sbjct 274988 TCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACA 274929 Query 283089 AATATCTGCATTTT 283102 || |||||||| || Sbjct 274928 AAGATCTGCATCTT 274915 >seq1 Length=3147266 Score = 136 bits (150), Expect = 8e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || || || ||||||||||| | |||| || | |||||||| || || || || ||||| Sbjct 843662 TCCTTCTGAATGTTGTAGTCGGACAAG-GTTCTACCATCCTCAAGCTGCTTACCAGCAAA 843604 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | || |||||| |||||||| ||||||||||| ||||| | || ||| | Sbjct 843603 GATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACGTT 843544 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | ||| || ||||| || || |||||||| ||||| ||||| || Sbjct 843543 GTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGAC 843484 Query 283088 GAATATCTGCAT 283099 || |||||||| Sbjct 843483 AAAGATCTGCAT 843472 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||| | || || | |||||| || || || || ||||| ||| Sbjct 843206 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAG 843147 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | || |||||| || |||||||||||||| || ||||| | || ||| | Sbjct 843146 ATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 843087 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| |||| || || || || || || |||||||| ||||| ||||| ||| Sbjct 843086 TCAATGGTGTCGGAAGACTCAACCTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACG 843027 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 843026 AAAATTTGCAT 843016 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||| | || || | ||||| || || || || ||||||||| Sbjct 843434 TCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAG 843375 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | || |||||| || |||||||||||||| |||||||| | || ||| | Sbjct 843374 ATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTG 843315 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || ||||| || || | || || ||||| || || |||||||| ||||| ||||| ||| Sbjct 843314 TCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACG 843255 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 843254 AAAATTTGCAT 843244 Score = 93.3 bits (102), Expect = 9e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||| | ||| || | |||||||| || || || ||||||||| Sbjct 842978 TCCTTCTGAATGTTGTAGTCGGAAAGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAG 842919 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | || || ||| ||| |||||||||||||| || ||||| | || ||| | Sbjct 842918 ATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 842859 Query 283029 TCGATAGTGTCCGA 283042 || |||||||| || Sbjct 842858 TCAATAGTGTCGGA 842845 >seq4 Length=1873953 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || |||| ||| || ||| || || |||||||||||||||| Sbjct 1428441 ACCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1428382 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | || ||||| || || || ||||| ||||| | | || |||||| || Sbjct 1428381 AAGGGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGG 1428322 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | || || ||||| || | || || Sbjct 1428321 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCAAC 1428262 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || | || || |||||||| ||||| ||||||||||| Sbjct 1428261 CTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 1428223 Score = 107 bits (118), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 317020 TCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTG 317079 |||| || ||||| || || | ||||||||| |||| || ||||||| || ||||| Sbjct 1732392 TCCTGGGTTGGGAAACCCTCAACCTGACCGTTGGCAATGGCTCTCATCAAAGTGGACTTA 1732451 Query 317080 CCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTG 317139 |||||||| || || || || ||||| || | | || |||||| | || | || Sbjct 1732452 CCAGCACCGTTTGGACCACAGAGACCGTATCTTCTACCTCTCTTCAATCTCAACTGAGTC 1732511 Query 317140 TTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCG 317199 ||||||| | |||||| |||| || || || ||||||||||| | ||| |||||||| Sbjct 1732512 TTGTTCAACAAGATCTTAGCACCGTAAGCGAGGGAGAACTCACAGTTACAGAGGTCCTCA 1732571 Query 317200 CC 317201 || Sbjct 1732572 CC 1732573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739039063848