Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03-
01] 12 sequences; 12,303,847 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 5e-30
seq7 131 1e-25
seq4 104 2e-17
>seq1
Length=3147266
Score = 145 bits (160), Expect = 5e-30
Identities = 175/236 (74%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||| |||| |||||| ||| |||||| |||||||||||
Sbjct 843249 TTGCATACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTA 843190
Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| ||| || || | || || |||||||| ||||| ||||| | | ||||||
Sbjct 843189 GTCGGAGAG--GGTTCTGCCATCTTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGG 843132
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|| | || | ||| ||||| ||| ||||| ||| | | | ||||||||||
Sbjct 843131 TCAGGTGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAA 843072
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| | ||||| ||||| || || | |||||||||||| ||||||||
Sbjct 843071 GACTCAACCTCAAGTGTAATAGTCTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016
Score = 140 bits (154), Expect = 2e-28
Identities = 174/234 (74%), Gaps = 6/234 (3%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| |||||| |||| |||||| || |||||| || |||||||| ||
Sbjct 843474 CATACCACCTCTCAATCTCAAAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTC 843415
Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| ||| || || | || || |||||||| ||||||||||| | | |||||| ||
Sbjct 843414 GGAGAG--GGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCA 843357
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283
| || | ||| ||||| ||| ||||| ||| || ||| | || || |||| |||
Sbjct 843356 GGTGGGATACCCTCCTTGTCCTGGATCTTAGACTT-AACGTTGTCAATAGTATCGGAGGA 843298
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | ||||| ||||| || || | |||||||||||| ||||||||
Sbjct 843297 CTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 843244
Score = 129 bits (142), Expect = 4e-25
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169
|| ||||||| ||||||||||| |||||| ||| |||||| || |||||||| |||| |
Sbjct 843698 CCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 843639
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| | | | || || |||||||| || |||||||| | | |||||| || | ||
Sbjct 843638 AAGGT-TCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGG 843580
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCA 44288
| ||||||||| || ||||| ||| || ||| | || ||||| | |||||| |
Sbjct 843579 AATACCTTCCTTGTCTTGAATCTTAGACTT-AACGTTGTCAATAGTGTCAGAGGATTCAA 843521
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | ||||| ||||| || || | |||||| || ||||| |||||
Sbjct 843520 CCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472
Score = 104 bits (114), Expect = 2e-17
Identities = 138/190 (73%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| |||||| |||| |||||| ||| |||||| || ||||||||
Sbjct 843021 TTGCATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTA 842962
Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
|||| || || || | || || |||||||| ||||||||||| | | |||||||
Sbjct 842961 GTCGGAAAG--GGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGA 842904
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|| | || | ||| ||||| ||| ||||| ||| | | | || ||||||| |
Sbjct 842903 TCAGGCGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAG 842844
Query 44282 GATTCCACCT 44291
|| || ||||
Sbjct 842843 GACTCAACCT 842834
>seq7
Length=431226
Score = 131 bits (144), Expect = 1e-25
Identities = 170/231 (74%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| ||| | ||||| |||||| ||| |||||| || |||||||| || |
Sbjct 275144 CCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 275085
Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
|| || || | || || |||||||| ||||||||||| | | |||||| || | |
Sbjct 275084 AG--GGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTG 275027
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | |||||| || ||| ||||| ||| || ||| | || ||||||| || ||
Sbjct 275026 GGATACCTTCTTTGTCCTGGATCTTGGACTTGACATTGT--CAATAGTGTCGGAAGACTC 274969
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || ||||| |||||||||||||| || ||||| |||||
Sbjct 274968 AACCTCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCAT 274918
>seq4
Length=1873953
Score = 104 bits (114), Expect = 2e-17
Identities = 158/223 (71%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| ||| | |||| || | ||| |||||| ||||||||||| ||
Sbjct 1428443 ATACCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCA 1428384
Query 44168 GCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| || || || |||| || |||||||| ||||| ||||| | | |||||| || |
Sbjct 1428383 GAAAG--GGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAG 1428326
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | ||| ||||| ||| ||||| ||| | | | |||||||| | ||| |
Sbjct 1428325 GTGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACT 1428266
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
| ||||||| ||||| ||||| || || | |||||| |||||
Sbjct 1428265 CAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTCTTAACGAA 1428223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990347351404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |