Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 165 2e-35 seq4 134 3e-26 seq7 123 6e-23 >seq1 Length=3147266 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || | || || || || || || || ||||| || || ||| Sbjct 843019 CAAATTTTCGTGAAGACCTTGACCGGTAAGACTATTACACTTGAGGTTGAGTCTTCCGAC 843078 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || ||||| || |||||||| Sbjct 843079 ACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCACCTGACCAGCAG 843138 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||||||||| || |||||||||||||| || || || |||| || ||| || Sbjct 843139 AGACTTATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAACATC 843198 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || || || | ||||||||| | ||| Sbjct 843199 CAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGA 843237 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || | || || || || || || |||||||| || ||| || Sbjct 843247 CAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAGTCCTCCGAT 843306 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||| |||||||| || || ||||| || |||||||| Sbjct 843307 ACTATTGACAACGTTAAGTCTAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAG 843366 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||| ||||| || ||||| |||||||| || || || |||| || ||| | Sbjct 843367 AGACTTATCTTTGCCGGTAAGCAGCTTGAAGATGGTAGAACCCTCTCCGACTACAACATT 843426 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || ||||| || || | ||||||||| | ||| Sbjct 843427 CAGAAGGAGTCAACCCTTCACTTGGTTTTGAGATTGAGA 843465 Score = 118 bits (130), Expect = 3e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 177953 AACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCA 178012 ||| || || || |||| || ||| ||||| || || |||||||| |||||||| Sbjct 842820 AACAATAACATTCTAGGTTGAGTCCTCCGACACTATTGACAACGTCAAGTCCAAGATTCA 842879 Query 178013 GGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGA 178072 |||||| || || ||||| || || ||||| |||||||||| ||||| || ||||| || Sbjct 842880 GGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGA 842939 Query 178073 AGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| || || ||| |||| || ||| | || || || || || || || | || || Sbjct 842940 GGATGGTAGAACCCTTTCCGACTACAACATTCAGAAGGAGTCCACTCTTCACTTGGTCTT 842999 Query 178133 GAGACTCAGA 178142 |||| | ||| Sbjct 843000 GAGATTGAGA 843009 >seq4 Length=1873953 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 |||||| || || | || || || || || ||| | ||||| || ||| |||||||| Sbjct 1428222 TTTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCAT 1428281 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || |||||||| ||||| |||||||| || || ||||| || |||||||| |||| Sbjct 1428282 TGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACT 1428341 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||||||| || |||||||| || || || || ||| | || || ||| |||| || Sbjct 1428342 TATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAA 1428401 Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || ||||| | || | ||| | ||| Sbjct 1428402 GGAGTCCACTTTGCATTTGGTCCTCAGATTGAGA 1428435 >seq7 Length=431226 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || ||||| | ||||| || || ||| Sbjct 274921 CAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCTTCCGAC 274980 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| |||||||||||||| ||||| || |||||||| Sbjct 274981 ACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGACCAGCAG 275040 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||| ||||| || ||||| || ||||| || || ||| | || || ||| | Sbjct 275041 AGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTACAACATT 275100 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 275101 CAGAAGGAGTCCACCCTTCA-CTTG 275124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731014926328