Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq4 111 1e-19 seq7 104 2e-17 >seq1 Length=3147266 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || || ||| ||||||||| ||||| |||||||||||||| | | || Sbjct 843227 AAAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCCATCT 843168 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||||||||| |||||||| || || | ||| ||||| | || | | |||||||||| Sbjct 843167 TCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 843108 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || | | ||| | | | |||||| ||||| ||||| | || || || Sbjct 843107 -TGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGTGTAATAGT 843049 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| |||| ||||| |||||||| ||||| Sbjct 843048 CTTACCGGTCAAGGTCTTCACGAAAATTTGCAT 843016 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| |||||||||||||| | | || || |||||||| ||||| || Sbjct 843435 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAA 843376 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || | ||| ||||| | || | | |||||||||| ||| || ||| |||| Sbjct 843375 GATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTAGACTT-AACGT 843317 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||| ||| ||||| ||||| | || || || ||||| |||| ||||| | Sbjct 843316 TGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTCTTCA 843257 Query 41850 CGAAAATCTGCAT 41862 ||||||| ||||| Sbjct 843256 CGAAAATTTGCAT 843244 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| || || ||| ||||||||||||||| |||||||| | ||| | | || Sbjct 843683 AACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAAGGTTCTACCATCC 843624 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || |||||||| || || || || || | ||| ||||| | |||| | ||||||| | Sbjct 843623 TCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTTGT-C 843565 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || | | |||| | | | |||||| || || ||||| | || || || Sbjct 843564 TTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAATAGT 843505 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| |||| ||||| || || |||||||| Sbjct 843504 CTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 843472 >seq4 Length=1873953 Score = 111 bits (122), Expect = 1e-19 Identities = 152/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||||| ||| ||||||||| ||||| ||||| || ||||| | |||| ||| Sbjct 1428422 ACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCTACCGTCCTCG 1428363 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| |||||||| || || | ||| ||||| | || | | |||||||||| | Sbjct 1428362 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGG 1428303 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| ||| | | | ||||| ||||| ||||||| || || || || Sbjct 1428302 ATCTTGGACTT-GACGTTGTCAATGGTGTCAGAGGACTCAACCTCCAAGGTAATGGTCTT 1428244 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCA 41861 ||| |||| ||||| |||||| ||||| Sbjct 1428243 ACCGGTCAAGGTCTTAACGAAA--CTGCA 1428217 >seq7 Length=431226 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| || || ||| ||||||||||||||| ||||| || ||||| | | || || Sbjct 275127 CACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCTACCATCCTC 275068 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| ||||| || || || | ||| ||||| | || | | || |||||| Sbjct 275067 AAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCTTCTTTGTCCTG 275008 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||| || ||| || | | | ||||||| ||||| ||||||| || || || | Sbjct 275007 GATCTTGGACTT-GACATTGTCAATAGTGTCGGAAGACTCAACCTCCAAAGTGATGGTCT 274949 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||| || ||||| || || |||||||| || Sbjct 274948 TACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 274915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303930654400