Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq13 136 3e-27 >seq13 Length=262405 Score = 136 bits (150), Expect = 3e-27 Identities = 402/613 (66%), Gaps = 34/613 (6%) Strand=Plus/Plus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 ||||||||||||| ||||| || | |||||||| || | ||| || |||||||| Sbjct 259281 TTAAGAGCATCAACATGATCACTGTACACATGAGCATCACCGAGAGTGTGAATAAACTCA 259340 Query 101738 CCAGGCACTAGATTAGTG----ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGC 101793 ||| || | || || || || |||||||| || || |||| || || Sbjct 259341 CCA--CAATCCAT--GTCCACCACTTGTGCAATCATCTTTGTCAAGAGAGCGTATGAGGC 259396 Query 101794 AATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAG 101853 |||||||||||| || || | ||||||||| |||||| ||||||||| ||| || || Sbjct 259397 AATGTTAAATGGAACACCGAGACCCATATCACATGATCTCTGATACAGTAAACAAGATAG 259456 Query 101854 CTTT---------CCATC---------ACAGACATAAAATTGACTTAATACATGACAAGG 101895 | | ||||| | |||||| |||||| || |||||||| || Sbjct 259457 TTGTGGCTTACCACCATCCTTTGGGAAATTGACATAGAATTGAGAAAAAACATGACATGG 259516 Query 101896 CGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATC 101955 || || |||| || || | ||||| ||||||||||| ||| | || |||||||| Sbjct 259517 TGGTAATGCCATCTTTGGGAAGTCTGGTGGATTCCAAGCACTCATAATGATTCTTCTATC 259576 Query 101956 TGTA-GGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTT 102014 ||| |||||||| || | ||| |||| | | ||| ||||| || | || Sbjct 259577 -GTATGGGTTTGTCTTCAACTTATGGATCACTTCAGCGAGTTGATCAACACCCTGGCCCG 259635 Query 102015 TATAATCGCGCCCAACA-CCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATAC 102073 | || || || ||| |||| || || || || || || ||||| || || ||||| Sbjct 259636 TGTAGTC-AGCATCACAGTCTTTGTACTCAGCACCAAAGTGTCTCCATTGGAAACCATAA 259694 Query 102074 ACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTA 102133 || || || | ||| |||||| | || || ||||| |||| | || ||| Sbjct 259695 ACTGGACCTAAATCACCTTCACGACGATCGGTTAATCCAAGACTATCGAGGTATTCTCTT 259754 Query 102134 GATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGAT 102193 |||||||| | |||||||| | ||| || | | |||| || | ||||| | Sbjct 259755 GATCCATTACCTTCCCAAATCTTCACTCCTTGTTCACTGAGCTTCTTACCATCAGTGCAG 259814 Query 102194 CCTCTGATAAACCACAACAGTTCTTCAACA--ACACCTCTCCAAAATACTCTCTTAGTAG 102251 || ||||||||||| ||||| ||| | | ||| | || || ||||||| | Sbjct 259815 CCGGCAATAAACCACAATAGTTC--CAAGATGATACCCTTAGTGAAGACCTTCTTAGTCG 259872 Query 102252 TTAAAAGTGGAAA 102264 |||| ||||| || Sbjct 259873 TTAACAGTGGGAA 259885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251089931275