Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq9 273 3e-68 seq6 170 2e-37 >seq9 Length=581722 Score = 273 bits (302), Expect = 3e-68 Identities = 1204/1888 (64%), Gaps = 42/1888 (2%) Strand=Plus/Minus Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 354715 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 354656 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 354655 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 354596 Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 354595 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 354536 Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 53041 ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 354535 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 354477 Query 53042 GGAAGGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCA 53098 |||| ||||| || || |||||||| || ||| || || | |||| || Sbjct 354476 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 354417 Query 53099 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 53158 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 354416 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 354357 Query 53159 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 53218 || |||| | || | |||| |||||| ||| || || ||||| | | | || || Sbjct 354356 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 354297 Query 53219 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 53278 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 354296 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 354237 Query 53279 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 53336 | |||||| | || | | | || |||| ||||||| ||| | ||| || || | Sbjct 354236 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 354177 Query 53337 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 53396 | | || || ||| ||| || || ||| ||| | Sbjct 354176 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 354119 Query 53397 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 53456 ||||||| ||||| || || || ||| | | ||| || ||| ||| |||||||| Sbjct 354118 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 354059 Query 53457 TTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGGATAATTTAA 53514 | |||||||||| | || | || | || || ||| | ||||||| || || Sbjct 354058 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 354001 Query 53515 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 53574 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 354000 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 353941 Query 53575 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT--- 53631 ||| || ||||||||| | || || || ||| || || ||| | || | ||| Sbjct 353940 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 353881 Query 53632 TCTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGT-CCATC 53685 | |||||| || | ||||| | | |||| | | || | | || ||||| Sbjct 353880 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 353821 Query 53686 TA------TTACAAACAT-GTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736 | || ||| | | | ||||||||| || |||| |||||||| || || || Sbjct 353820 AAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTC 353761 Query 53737 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 53796 | | || | |||| | |||||| || | ||| | ||||||| | || || Sbjct 353760 TTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAA 353701 Query 53797 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGT 53856 || | || ||| |||| | |||||| |||||||| ||||| |||||||| |||||||| Sbjct 353700 GTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGT 353641 Query 53857 TTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTA 53916 ||| |||||| || | || || | ||| | ||||||| | | ||| || Sbjct 353640 CTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTA 353583 Query 53917 TCTCTTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCAAACTCGTCTCCCCAAACATT 53973 | | |||||| ||| | ||| | | | || || || || || || || Sbjct 353582 CCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTTGAAT-TCATCACCATAACAATC 353524 Query 53974 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033 | | || || ||||| ||| | | ||| | ||| || || | | || || || Sbjct 353523 AGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGACTCAACACG 353464 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 54093 || ||| || | |||||| ||||| | ||| || | ||| | | ||| || || Sbjct 353463 TTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTTC 353404 Query 54094 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 54153 || || ||||||| ||| |||| ||| | | ||||| | ||||| |||||||| Sbjct 353403 TTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAA 353344 Query 54154 GTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 54213 || | || | | ||||| | ||||| || || || || | ||| | ||| ||||| Sbjct 353343 ATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTT 353284 Query 54214 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273 ||| | || | | ||||||||| | ||| || || | ||| || || || | || || Sbjct 353283 GTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTA 353224 Query 54274 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGAT 54333 || | || | || ||| || || ||| || || || || | || ||||| Sbjct 353223 AGAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGAT 353164 Query 54334 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 54393 || || ||| |||| || || |||||||| ||||| || ||| || |||| | Sbjct 353163 CAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCAC 353104 Query 54394 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 54453 || ||||| ||||| || | | || || || || || || || |||||||| Sbjct 353103 AAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGC 353044 Query 54454 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513 ||| || || || | ||||| | || || || ||||| ||| |||| | ||||| | Sbjct 353043 GTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCT 352984 Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573 ||| || || | ||||| | ||| | || ||||| || | |||| ||| || Sbjct 352983 ACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTACC 352924 Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 54631 || | || |||||| ||| | ||||| || || |||||||| ||||| || |||| Sbjct 352923 ATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGAA 352864 Query 54632 AAGTCTCGTTCGTAAATAATAACTGAGT 54659 | |||| ||||| || || | |||| Sbjct 352863 A--TCTCTATCGTAGATGATGGCAGAGT 352838 >seq6 Length=680632 Score = 170 bits (188), Expect = 2e-37 Identities = 406/608 (67%), Gaps = 12/608 (2%) Strand=Plus/Minus Query 24117 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 24176 ||||| ||||| |||||| || || || ||| | ||| || || | | ||| || Sbjct 382411 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 382352 Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236 || || || || || | || ||||| | || | ||| || | ||| || || || ||| Sbjct 382351 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 382292 Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296 || || ||||| ||||| || ||||| || || |||||||||| |||||| || || | Sbjct 382291 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 382232 Query 24297 CCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 24353 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 382231 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 382172 Query 24354 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 24413 || ||||| || |||||||| | ||| | | | ||| || | ||| || ||| Sbjct 382171 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 382112 Query 24414 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 24473 ||||| ||| || | || || |||||||| || || ||||| || ||||||||| Sbjct 382111 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 382052 Query 24474 CATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCT--GCTAAATTTTCATTCA 24531 || |||| || | ||| || || || | | || ||||| | || || ||||| | Sbjct 382051 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAA--GTTCTCAACCAAGTTCTCATTAA 381994 Query 24532 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT-AAAATATTTTTCGTCT 24590 | || |||||| || ||||| || || | ||| | || || | | || ||| Sbjct 381993 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 381934 Query 24591 GGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 24647 | | | | || |||||||||| | ||| ||||| | ||| | || || | ||| Sbjct 381933 CAT-TCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTC 381875 Query 24648 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAA 24707 || || || || || ||||| || || | |||||| ||||| || | ||||| ||| Sbjct 381874 CAGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAA 381815 Query 24708 ATAACAAA 24715 | |||||| Sbjct 381814 AGAACAAA 381807 Score = 167 bits (184), Expect = 3e-36 Identities = 379/562 (67%), Gaps = 6/562 (1%) Strand=Plus/Minus Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || | Sbjct 464880 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 464821 Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900 |||| || ||||||||||| || ||||| | || | | ||| | |||||| Sbjct 464820 TGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCTGAGCCT 464761 Query 53901 TTATTATAGA-TTTGTATCTCTTTTCTCTTTCGTATAGTGT-ATACAATCGTTCAAACTC 53958 | || | |||| || || || | || ||| ||| ||||| | | |||| || Sbjct 464760 TAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATT-TGTGATACAGTTGAACAAATTC 464703 Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018 || || | || | | ||| |||||| ||||| |||| | ||| |||| ||| | Sbjct 464702 TTCACCATACACCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTTC 464643 Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078 || | || ||| || ||| || ||||| || ||||| ||||| ||| | ||| | Sbjct 464642 ATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAATCACG 464583 Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATATCAG 54137 | ||| || || ||||| |||||| ||||| | || || |||| | ||||| Sbjct 464582 AGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAAT-CCATCACATCAG 464524 Query 54138 AATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 54197 |||||| |||||||| || |||| | | || || | || || || || ||||| | Sbjct 464523 CATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAA 464464 Query 54198 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCAT 54257 ||||| |||||||||||| | ||||| | ||| || | ||||| || || | ||||| Sbjct 464463 CATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCAT 464404 Query 54258 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCC 54317 | | |||| || || ||| |||| | ||| || || |||||| || || | Sbjct 464403 TTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATGTAGACCGATACCAC 464344 Query 54318 CTGCCATTTTAGAGATTAATGC 54339 | || || |||||||| || Sbjct 464343 CAGCAGCCTTCGAGATTAAAGC 464322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721414462000