Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 168 7e-37 seq7 100 3e-16 seq5 98.7 1e-15 seq16 96.9 4e-15 >seq6 Length=680632 Score = 168 bits (186), Expect = 7e-37 Identities = 409/615 (67%), Gaps = 11/615 (2%) Strand=Plus/Plus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGC--GCATGT 116648 |||||| ||||| || || ||||||| || | |||| || || |||| |||| Sbjct 381792 GAGAACAAGCGCCGTTTTGTTCTTTTCCCAATCAAGTACCATGAGATCTGGCAGGCAT-- 381849 Query 116649 ACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGA 116708 |||| ||||| || || || |||||||||| |||||| | || |||| ||||| | Sbjct 381850 ACAAGAAGGCTGAAGCTTCTTTCTGGACCGCTGAGGAGATTGATTTGTCTAAGGATTTGC 381909 Query 116709 GCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCT 116765 || ||| | | ||||| || || || || |||||| | || || |||| Sbjct 381910 ATGATTGGAACAACAGATTGAATGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCT 381969 Query 116766 TTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGG 116825 | || ||||| ||||| ||||| || ||||| |||| ||| ||| || |||| Sbjct 381970 TCTTTGCCGCTTCTGACGGTATCGTTAATGAGAACTTGGTTGAGAACTTCTCTGCCGAGG 382029 Query 116826 TGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACT 116885 |||| | | || || ||| |||||||| || || ||| ||||||||| | |||| Sbjct 382030 TGCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATCATGATGGAGAACATTCACT 382089 Query 116886 CGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGT- 116944 | || | || || | | || ||||| || | | | | || ||| || Sbjct 382090 CTGAGACATACTCTCTCTTGATTGACACTTATATCAAGGATCCACAACAG--GCTGAGTA 382147 Query 116945 -TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCG 117003 ||||| || ||||| ||||| || || || | || ||||||| || ||||| || | Sbjct 382148 TTTGTTTAATGCCATTGAGACTATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAG 382207 Query 117004 CTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063 ||||| |||| ||| ||| ||||| ||| | || || ||||| || || || || Sbjct 382208 ATGGATTGCCGATGAAGAAGCCTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGA 382267 Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123 || ||||||| || || || ||| | || || ||| | ||||| | || | || Sbjct 382268 AGGTATCTTCTTCTCTGGTTCCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGAT 382327 Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTT 117183 ||| || |||||||| || ||| | || | | | || || ||| |||| ||||| Sbjct 382328 GCCAGGTTTGACTTTCTCTAATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTT 382387 Query 117184 TGCCTGTTTGCTGTT 117198 |||||||||| |||| Sbjct 382388 TGCCTGTTTGTTGTT 382402 >seq7 Length=598726 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | || || || ||||| ||| | || || || || | |||| | | Sbjct 431899 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 431840 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| ||||| ||||| | |||||||| |||| Sbjct 431839 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACT 431781 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || |||| | ||||| ||||||||||||||||| Sbjct 431780 TATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAA 431721 Query 40878 GGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||| |||| ||||| | || | | ||||| || || Sbjct 431720 GGAGTCCACTTTGCATTTGGTCCTCAGATTGAGAGGTGG 431682 >seq5 Length=1064489 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || || || || || || | || || || || || Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||| || || | ||||| Sbjct 816170 GACACTATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCA 816228 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| || | || || || ||||| || || | | |||||| ||||||||| Sbjct 816229 GCAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAA 816288 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| |||| || || | || ||| | ||||| || || Sbjct 816289 CATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 816336 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/156 (73%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 |||| ||||| || |||| ||||| ||||| ||||| | || ||||| |||| || Sbjct 815954 AACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTAT 816012 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || || || || ||||| || || | | ||||| ||||||||||||||||||||| Sbjct 816013 CTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCCGACTACAACATCCAGAAGGA 816072 Query 40881 GGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 | |||| || || | || ||| | ||||| || || Sbjct 816073 GTCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 816108 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| ||||| | |||||||| |||| |||| || || || ||||| || Sbjct 816431 GACAAGGAGGGTATCCCACCTGACCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAA 816490 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | | |||||| |||||||||||| ||||||||| | || || || | || ||| Sbjct 816491 GATGGTAGAACCCTCTCCGACTACAACATTCAGAAGGAGTCGACCCTTCACTTGGTTTTG 816550 Query 40903 CGCTTGAGGGGCGG 40916 | ||||| || || Sbjct 816551 AGATTGAGAGGTGG 816564 >seq16 Length=161790 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || |||||||| || |||||||| | || || || | Sbjct 4343 AAGATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCT 4402 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | ||||| || || | |||||||| || ||||| | ||| Sbjct 4403 TCCGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGAC 4462 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| |||| |||| || || || ||||| || || | | ||||| |||||| Sbjct 4463 CAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTAC 4522 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 ||||| ||||||||| |||| || || | ||| | | ||||| || || || Sbjct 4523 AACATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTGG 4575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219038994000