Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq6 168 7e-37
seq7 100 3e-16
seq5 98.7 1e-15
seq16 96.9 4e-15
>seq6
Length=680632
Score = 168 bits (186), Expect = 7e-37
Identities = 409/615 (67%), Gaps = 11/615 (2%)
Strand=Plus/Plus
Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGC--GCATGT 116648
|||||| ||||| || || ||||||| || | |||| || || |||| ||||
Sbjct 381792 GAGAACAAGCGCCGTTTTGTTCTTTTCCCAATCAAGTACCATGAGATCTGGCAGGCAT-- 381849
Query 116649 ACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGA 116708
|||| ||||| || || || |||||||||| |||||| | || |||| ||||| |
Sbjct 381850 ACAAGAAGGCTGAAGCTTCTTTCTGGACCGCTGAGGAGATTGATTTGTCTAAGGATTTGC 381909
Query 116709 GCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCT 116765
|| ||| | | ||||| || || || || |||||| | || || ||||
Sbjct 381910 ATGATTGGAACAACAGATTGAATGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCT 381969
Query 116766 TTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGG 116825
| || ||||| ||||| ||||| || ||||| |||| ||| ||| || ||||
Sbjct 381970 TCTTTGCCGCTTCTGACGGTATCGTTAATGAGAACTTGGTTGAGAACTTCTCTGCCGAGG 382029
Query 116826 TGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACT 116885
|||| | | || || ||| |||||||| || || ||| ||||||||| | ||||
Sbjct 382030 TGCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATCATGATGGAGAACATTCACT 382089
Query 116886 CGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGT- 116944
| || | || || | | || ||||| || | | | | || ||| ||
Sbjct 382090 CTGAGACATACTCTCTCTTGATTGACACTTATATCAAGGATCCACAACAG--GCTGAGTA 382147
Query 116945 -TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCG 117003
||||| || ||||| ||||| || || || | || ||||||| || ||||| || |
Sbjct 382148 TTTGTTTAATGCCATTGAGACTATTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAG 382207
Query 117004 CTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063
||||| |||| ||| ||| ||||| ||| | || || ||||| || || || ||
Sbjct 382208 ATGGATTGCCGATGAAGAAGCCTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGA 382267
Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123
|| ||||||| || || || ||| | || || ||| | ||||| | || | ||
Sbjct 382268 AGGTATCTTCTTCTCTGGTTCCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGAT 382327
Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTT 117183
||| || |||||||| || ||| | || | | | || || ||| |||| |||||
Sbjct 382328 GCCAGGTTTGACTTTCTCTAATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTT 382387
Query 117184 TGCCTGTTTGCTGTT 117198
|||||||||| ||||
Sbjct 382388 TGCCTGTTTGTTGTT 382402
>seq7
Length=598726
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || | || || || ||||| ||| | || || || || | |||| | |
Sbjct 431899 TTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGACACCATT 431840
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| ||||| ||||| | |||||||| ||||
Sbjct 431839 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGAGACT 431781
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| || || ||||| || |||| | ||||| |||||||||||||||||
Sbjct 431780 TATCTTCGCCGGTAAGCAGCTCGAGGACGGTAGAACCCTTTCTGACTACAACATCCAGAA 431721
Query 40878 GGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||| |||| ||||| | || | | ||||| || ||
Sbjct 431720 GGAGTCCACTTTGCATTTGGTCCTCAGATTGAGAGGTGG 431682
>seq5
Length=1064489
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || || || || | || || || || ||
Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || |||| ||||| ||||| || || | |||||
Sbjct 816170 GACACTATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCA 816228
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| || | || || || ||||| || || | | |||||| |||||||||
Sbjct 816229 GCAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAA 816288
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| ||||||||| |||| || || | || ||| | ||||| || ||
Sbjct 816289 CATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 816336
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/156 (73%), Gaps = 1/156 (1%)
Strand=Plus/Plus
Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820
|||| ||||| || |||| ||||| ||||| ||||| | || ||||| |||| ||
Sbjct 815954 AACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCGCCTGATCAGCAGAGACTTAT 816012
Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880
|| || || || ||||| || || | | ||||| |||||||||||||||||||||
Sbjct 816013 CTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCCGACTACAACATCCAGAAGGA 816072
Query 40881 GGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
| |||| || || | || ||| | ||||| || ||
Sbjct 816073 GTCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGG 816108
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| ||||| | |||||||| |||| |||| || || || ||||| ||
Sbjct 816431 GACAAGGAGGGTATCCCACCTGACCAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAA 816490
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | | |||||| |||||||||||| ||||||||| | || || || | || |||
Sbjct 816491 GATGGTAGAACCCTCTCCGACTACAACATTCAGAAGGAGTCGACCCTTCACTTGGTTTTG 816550
Query 40903 CGCTTGAGGGGCGG 40916
| ||||| || ||
Sbjct 816551 AGATTGAGAGGTGG 816564
>seq16
Length=161790
Score = 96.9 bits (106), Expect = 4e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || || || || |||||||| || |||||||| | || || || |
Sbjct 4343 AAGATGCAGATCTTTGTTAAGACCCTCACGGGTAAGACCATCACTTTGGAGGTTGAGTCT 4402
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | ||||| || || | |||||||| || ||||| | |||
Sbjct 4403 TCCGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAAGAAGGTATCCCACCTGAC 4462
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| |||| |||| || || || ||||| || || | | ||||| ||||||
Sbjct 4463 CAGCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGATGGTAGAACCCTTTCTGACTAC 4522
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919
||||| ||||||||| |||| || || | ||| | | ||||| || || ||
Sbjct 4523 AACATTCAGAAGGAGTCCACCCTTCACTTGGTGCTCAGATTGAGAGGTGGTGG 4575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219038994000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |