Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq6 161 9e-35 >seq6 Length=680632 Score = 161 bits (178), Expect = 9e-35 Identities = 373/560 (67%), Gaps = 13/560 (2%) Strand=Plus/Minus Query 16225 AAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGA 16284 ||||| | ||| ||||| ||| ||||| ||||| || | | || ||||| || || Sbjct 382403 AAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGA 382344 Query 16285 AAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACC 16344 || || | ||||||||| | |||| || || | ||| || |||| |||||| ||||| Sbjct 382343 GAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACC 382284 Query 16345 AGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtt 16404 ||| ||||| ||||||||||| |||||||| ||||| | || ||||||| || | Sbjct 382283 AGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTC 382224 Query 16405 tttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTC 16464 || | | |||||| | |||||||| || || | |||| ||| || |||| Sbjct 382223 TTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTC 382164 Query 16465 TATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAA 16524 || |||||||| ||||| | | || ||| |||||||| || || | | Sbjct 382163 AATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCAATCAAGAG 382104 Query 16525 ACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGC 16584 | || | || || ||||| |||||||| || || ||||| || || || |||| Sbjct 382103 AGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGC 382044 Query 16585 TTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATC 16644 ||| | ||||| || || | | || | || | ||||| || ||||| || || || Sbjct 382043 TTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTC 381984 Query 16645 GCTAGCTGCAAAAAACGCAAGTA----TGTGTTTAATAAAAttt--ttttCGTT--ATCT 16696 ||| ||||| || ||||| | | | | || ||| || || || || |||| Sbjct 381983 AGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCATTCAATCT 381924 Query 16697 GAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAA 16756 | || ||| ||| ||||| || || ||||| | ||| || | ||||| ||| Sbjct 381923 G-----TTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAA 381869 Query 16757 GAAGCAACAGCCTTTTTATA 16776 ||||| ||||||| || || Sbjct 381868 GAAGCTTCAGCCTTCTTGTA 381849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511855465000