Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 2e-31
>seq6
Length=680632
Score = 150 bits (166), Expect = 2e-31
Identities = 547/844 (65%), Gaps = 19/844 (2%)
Strand=Plus/Minus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
|||||||| ||| |||||| || |||||||||||||| ||||| ||| || || ||
Sbjct 382684 TTTTGATAATCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTC 382625
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032
|||||||| || ||||| || | | | | || | ||| || | | ||
Sbjct 382624 TCCATAAAGTCGAATGGGTTAGAAACGTTGTAGAACTTCTTGTTACCAAGGGCAATAAGA 382565
Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092
| | ||| ||| ||||| || |||||| ||| | | |||||||| | |
Sbjct 382564 AGACGATCAGCACAGAACTGAACGTATTGAACCATAAGCTTGGCGTTCATACCGAGCAAA 382505
Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152
| |||| || ||| || | || ||| || ||||| || | |||||
Sbjct 382504 GAAGCTGGAAGAGCATCGGTAAAGTACTCAGATTCAATCTCAACAGCTTCAGTAATAATC 382445
Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212
|| | ||| ||| ||| || | || | ||| ||| | ||||| |||||
Sbjct 382444 TTCTCCACAATCTCAGAAGATGGCTTGTTCTTCAAATGAGCAAACAACAAACAGGCAAAG 382385
Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272
||| || | || ||||| | | ||| | || || || || || || |||||||||
Sbjct 382384 TCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCTGGCATC 382325
Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332
|| |||| || || ||||| || || | || || || || || ||||| || || |||
Sbjct 382324 AAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATACCTTCA 382265
Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392
|| || ||||| || | | || || || ||| | |||| || | | |||||| |
Sbjct 382264 ACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTCTTCATCGGCAATCCATCTC 382205
Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452
|||||| |||| || || |||||| | || || ||||| |||||||| ||||
Sbjct 382204 AAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAACAAATAC 382145
Query 14453 TCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT-AAGTAAGCTATACATTTCAGAG 14509
|| || || | | |||| || || || ||||| ||| || || | ||||||
Sbjct 382144 TCAGCCTGTTGTGGATCCTTG--ATATAAGTGTCAATCAAGAGAG-AGTATGTCTCAGAG 382088
Query 14510 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14569
|| ||||| ||||| || || ||||| || ||||| ||||||||| ||| |||
Sbjct 382087 TGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGCACC 382028
Query 14570 TCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14629
|| | | || | || |||| || |||||||| ||||| ||| ||| ||||| ||
Sbjct 382027 TCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGAAGCGGCAAAGAAG 381968
Query 14630 GCCA----ATATGTTTTTAATAAA-GT--ATTGCTC-TTCATTGCTGAGTTTTTTCCAAT 14681
|| | | | | || ||| || ||| ||| |||| | ||| || |||||||
Sbjct 381967 GCAAGAACACGAGAGATGAAGAAACGTTCATT-CTCATTCAAT-CTG---TTGTTCCAAT 381913
Query 14682 CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTT 14741
| ||||||||||| | ||| | || ||| | ||||| ||| ||| |||| || |
Sbjct 381912 CATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAAGCTTCAGCCTTCT 381853
Query 14742 TATA 14745
| ||
Sbjct 381852 TGTA 381849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345449267000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |