Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq6 150 2e-31 >seq6 Length=680632 Score = 150 bits (166), Expect = 2e-31 Identities = 547/844 (65%), Gaps = 19/844 (2%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| ||| |||||| || |||||||||||||| ||||| ||| || || || Sbjct 382684 TTTTGATAATCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTC 382625 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032 |||||||| || ||||| || | | | | || | ||| || | | || Sbjct 382624 TCCATAAAGTCGAATGGGTTAGAAACGTTGTAGAACTTCTTGTTACCAAGGGCAATAAGA 382565 Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092 | | ||| ||| ||||| || |||||| ||| | | |||||||| | | Sbjct 382564 AGACGATCAGCACAGAACTGAACGTATTGAACCATAAGCTTGGCGTTCATACCGAGCAAA 382505 Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152 | |||| || ||| || | || ||| || ||||| || | ||||| Sbjct 382504 GAAGCTGGAAGAGCATCGGTAAAGTACTCAGATTCAATCTCAACAGCTTCAGTAATAATC 382445 Query 14153 ATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212 || | ||| ||| ||| || | || | ||| ||| | ||||| ||||| Sbjct 382444 TTCTCCACAATCTCAGAAGATGGCTTGTTCTTCAAATGAGCAAACAACAAACAGGCAAAG 382385 Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272 ||| || | || ||||| | | ||| | || || || || || || ||||||||| Sbjct 382384 TCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCTGGCATC 382325 Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332 || |||| || || ||||| || || | || || || || || ||||| || || ||| Sbjct 382324 AAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATACCTTCA 382265 Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392 || || ||||| || | | || || || ||| | |||| || | | |||||| | Sbjct 382264 ACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTCTTCATCGGCAATCCATCTC 382205 Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452 |||||| |||| || || |||||| | || || ||||| |||||||| |||| Sbjct 382204 AAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAACAAATAC 382145 Query 14453 TCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT-AAGTAAGCTATACATTTCAGAG 14509 || || || | | |||| || || || ||||| ||| || || | |||||| Sbjct 382144 TCAGCCTGTTGTGGATCCTTG--ATATAAGTGTCAATCAAGAGAG-AGTATGTCTCAGAG 382088 Query 14510 TGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC 14569 || ||||| ||||| || || ||||| || ||||| ||||||||| ||| ||| Sbjct 382087 TGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGCACC 382028 Query 14570 TCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAAT 14629 || | | || | || |||| || |||||||| ||||| ||| ||| ||||| || Sbjct 382027 TCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGAAGCGGCAAAGAAG 381968 Query 14630 GCCA----ATATGTTTTTAATAAA-GT--ATTGCTC-TTCATTGCTGAGTTTTTTCCAAT 14681 || | | | | || ||| || ||| ||| |||| | ||| || ||||||| Sbjct 381967 GCAAGAACACGAGAGATGAAGAAACGTTCATT-CTCATTCAAT-CTG---TTGTTCCAAT 381913 Query 14682 CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTT 14741 | ||||||||||| | ||| | || ||| | ||||| ||| ||| |||| || | Sbjct 381912 CATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAGAAAGAAGCTTCAGCCTTCT 381853 Query 14742 TATA 14745 | || Sbjct 381852 TGTA 381849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345449267000