Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq9 241 1e-58
seq6 127 2e-24
seq5 95.1 1e-14
>seq9
Length=581722
Score = 241 bits (266), Expect = 1e-58
Identities = 1106/1737 (64%), Gaps = 44/1737 (3%)
Strand=Plus/Minus
Query 22153 ATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTT 22212
||| ||||| || ||||||| |||| ||||||| |||| || || || || ||||| ||
Sbjct 354672 ATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTT 354613
Query 22213 TCCATAACTCGGCAAGTCCA-TGTACACATTGAACGACTGACTCTGATCGATAAACGCTC 22271
|| | | || | || | ||| | || || || ||| ||||| || || ||
Sbjct 354612 ACCCATAGTTGG-AGCTCTAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAG 354554
Query 22272 CTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACA 22331
| ||||| || ||||||| || | || || || ||||| |||||||||||||
Sbjct 354553 CACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACA 354494
Query 22332 GTTGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATG 22390
| | | || || || | || | | | || | || ||||||| |||
Sbjct 354493 AATCTTTCAATTCCTTTGGAAT-GTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATG 354435
Query 22391 ATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGA 22450
|| | | || || | || | ||| | ||| | | |||||| | || ||
Sbjct 354434 ATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATAT 354375
Query 22451 CGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510
|||| || | || || || || | | ||| || || ||||||||| || ||| |
Sbjct 354374 GGGTTAACAATCTGGAATTCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTAT 354315
Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570
||||||||| |||| |||| |||| || |||| ||||| || || ||||| || ||
Sbjct 354314 GGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCA 354255
Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGT 22628
| || | ||||||||||| |||| ||| ||| | | ||| ||| ||| ||| |
Sbjct 354254 ACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTTAAGAGTATC--CCAAT 354197
Query 22629 CCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCG 22688
|||||| |||||| ||| | | |||| | || | || | | || | |
Sbjct 354196 CCCACAAATCGGAAGGCTTTC---TTCCCCAAAGGTCAAACTGAAGCTGACCCTTAGAAG 354140
Query 22689 CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCT 22748
| ||| |||| | | | |||||| ||||| | | ||| || || | ||
Sbjct 354139 CTGGGGAACCTTGGAATGATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACT 354080
Query 22749 CCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGC 22808
|||| || ||| ||| || ||||||||||| | |||||||||| || |
Sbjct 354079 CCAAAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAG 354020
Query 22809 TTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGA 22868
||| | |||| ||||| |||| || || || || | ||| ||||| || | | |
Sbjct 354019 ATTCAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAA 353960
Query 22869 TCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGA 22928
| |||| |||| ||| ||| || | | || || || | || || | || || |
Sbjct 353959 TTGGTCTGTTTCTCATATTGGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAA 353900
Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988
| ||||||||||||| | || |||| || | || ||||||| |
Sbjct 353899 TGATTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTAT 353840
Query 22989 AAACGCCCGATTG-TACAA-CAA---ACTTGTTGACG------------GCGATCGAGGC 23031
|| | | || || ||| | ||| | || | | | || || |||||
Sbjct 353839 AA--GTCTGAGTGGTACCATCAAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGC 353782
Query 23032 AAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATT 23091
| || || || || || || ||| | | ||| || ||||| || ||| | ||
Sbjct 353781 CAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTT 353722
Query 23092 GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTT-TCGATTGCACGAATCCTTGT 23150
| |||| ||| | ||||| || ||||||| | || ||| || || | ||||||||
Sbjct 353721 AGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCG-TTACAGGCATCCTTGT 353663
Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210
| |||||| | || || || ||||| ||| | || | ||| || ||||| | |
Sbjct 353662 AAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTT 353603
Query 23211 GAGCGTGAACACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTC 23268
|||| | ||| ||| | |||| ||||||| ||| ||||| | || | || |
Sbjct 353602 GAGCCTTGACA-GTCTTTC-TACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT 353545
Query 23269 AAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCA 23328
||||| |||| ||||| || || || || || | || | ||| | | | | ||||
Sbjct 353544 GAATTCATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCA 353485
Query 23329 CATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385
|| | |||| ||||| ||| ||| || | ||| || ||||| | || |||
Sbjct 353484 --TTCAC-CATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAA 353428
Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445
|| || || || | | ||| ||||| ||| |||||| | | || | || || ||
Sbjct 353427 CAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAA 353368
Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505
| || || ||||| || || | |||| |||||| || || |||||||| || || ||
Sbjct 353367 GATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACC 353308
Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
|| ||||||||||| || |||||||| | || | | ||| || | | |||||| ||
Sbjct 353307 TTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGA 353248
Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625
| ||| || || | |||||| | |||| |||||| || | ||| |||||
Sbjct 353247 AGTACCGTTAGTACCAGCAATGTAAGAACCTGTAGCTCTAACGTTATGGATGTGTAAACC 353188
Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685
|| || || | | || || |||| || |||||||||| ||| || ||||| |||||
Sbjct 353187 GATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTC 353128
Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745
|||| || ||| | | || || | |||||| || ||||| || | | || ||| |
Sbjct 353127 GATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACC 353068
Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805
|| ||||| || || ||||| || ||||||| | ||||| || || || ||
Sbjct 353067 AGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGT 353008
Query 23806 GTCGATGGCGGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCA 23861
|| || | | | ||| | |||| || || |||||||| ||||| | ||| ||||
Sbjct 353007 CTCAATAACTGATTTAATAT-CTCTACCATGGATACCGATAGCGACTCTCATGATCA 352952
>seq6
Length=680632
Score = 127 bits (140), Expect = 2e-24
Identities = 314/471 (67%), Gaps = 4/471 (1%)
Strand=Plus/Minus
Query 23097 ACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCA 23156
|||| || || |||||||| |||| || || |||| ||| || | |||||| |||||||
Sbjct 464880 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 464821
Query 23157 TGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT 23216
|| | || || || || || || || || | ||| | |||| | ||||||| |
Sbjct 464820 TGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCTGAGCCT 464761
Query 23217 GAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCG 23275
|| | || | || ||||| | ||| || || || |||| |||||||
Sbjct 464760 TAAT-CTTCTTCTTTGCCAATCCTTCCTTCTCATATTTGTGATACAGTTGAACAAATTCT 464702
Query 23276 GCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGA 23334
|||| || || || || || | | |||| |||| | | | ||| |
Sbjct 464701 TCACCATACACCTCATTCAAACCAGGAGCAT-CATCTGGACTAAACAAGCACCATTCTTC 464643
Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394
|| || ||||| | ||| || ||||| || ||||||||||| || |||| || ||
Sbjct 464642 ATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAATCACG 464583
Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454
|| | || ||| || || || ||||| | || | || || |||| ||| || ||
Sbjct 464582 AGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAATCCATCACATCAGC 464523
Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514
|||||| || || | || | |||||| || || ||||||||||| || || ||||| ||
Sbjct 464522 ATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAAC 464463
Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
|| | || ||||| || ||||||| ||||| || |||| |||||| ||
Sbjct 464462 ATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGA 464412
>seq5
Length=1064489
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| |||| || || || || || |||| |||||| | ||
Sbjct 816566 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 816625
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | | || |||| | | | ||| | | |||||||||| | || || |||||
Sbjct 816626 GACACTATTGACAACGTTAAGTCTAAGATTCAAG-ACAAGGAAGGTATTCCACCTGACCA 816684
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || ||||| || ||| | || || || ||| || ||| || ||
Sbjct 816685 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACTTTGTCCGACTACAA 816744
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||| || || || |||||||| |||| | ||| |||| || |||
Sbjct 816745 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 816793
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| |||| || || || || || | || ||||| | |||
Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | || ||||||||| || | || || ||||||
Sbjct 816170 GACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 816229
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || || || || || ||| | ||||| | || | ||| || |||
Sbjct 816230 CAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 816289
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || || |||||||| |||| | ||| |||| || ||||
Sbjct 816290 ATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTA 816338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766260698000
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