Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq9 241 1e-58 seq6 127 2e-24 seq5 95.1 1e-14 >seq9 Length=581722 Score = 241 bits (266), Expect = 1e-58 Identities = 1106/1737 (64%), Gaps = 44/1737 (3%) Strand=Plus/Minus Query 22153 ATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTT 22212 ||| ||||| || ||||||| |||| ||||||| |||| || || || || ||||| || Sbjct 354672 ATAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTT 354613 Query 22213 TCCATAACTCGGCAAGTCCA-TGTACACATTGAACGACTGACTCTGATCGATAAACGCTC 22271 || | | || | || | ||| | || || || ||| ||||| || || || Sbjct 354612 ACCCATAGTTGG-AGCTCTAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAG 354554 Query 22272 CTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACA 22331 | ||||| || ||||||| || | || || || ||||| ||||||||||||| Sbjct 354553 CACGATCAGCAGCCATATCGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACA 354494 Query 22332 GTTGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATG 22390 | | | || || || | || | | | || | || ||||||| ||| Sbjct 354493 AATCTTTCAATTCCTTTGGAAT-GTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATG 354435 Query 22391 ATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGA 22450 || | | || || | || | ||| | ||| | | |||||| | || || Sbjct 354434 ATGTGACTCTTCATAGAGTCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATAT 354375 Query 22451 CGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510 |||| || | || || || || | | ||| || || ||||||||| || ||| | Sbjct 354374 GGGTTAACAATCTGGAATTCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTAT 354315 Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570 ||||||||| |||| |||| |||| || |||| ||||| || || ||||| || || Sbjct 354314 GGTTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCA 354255 Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGT 22628 | || | ||||||||||| |||| ||| ||| | | ||| ||| ||| ||| | Sbjct 354254 ACAAGCAAAGAGTTTCTCAAACCGTACTTGACAATATCAGCCTTAAGAGTATC--CCAAT 354197 Query 22629 CCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCG 22688 |||||| |||||| ||| | | |||| | || | || | | || | | Sbjct 354196 CCCACAAATCGGAAGGCTTTC---TTCCCCAAAGGTCAAACTGAAGCTGACCCTTAGAAG 354140 Query 22689 CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCT 22748 | ||| |||| | | | |||||| ||||| | | ||| || || | || Sbjct 354139 CTGGGGAACCTTGGAATGATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACT 354080 Query 22749 CCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGC 22808 |||| || ||| ||| || ||||||||||| | |||||||||| || | Sbjct 354079 CCAAAGCAGCGTGATAAATGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAG 354020 Query 22809 TTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGA 22868 ||| | |||| ||||| |||| || || || || | ||| ||||| || | | | Sbjct 354019 ATTCAAATGGCAAACGCAAAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAA 353960 Query 22869 TCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGA 22928 | |||| |||| ||| ||| || | | || || || | || || | || || | Sbjct 353959 TTGGTCTGTTTCTCATATTGGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAA 353900 Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988 | ||||||||||||| | || |||| || | || ||||||| | Sbjct 353899 TGATTCTGTTCAAGTTCTTTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTAT 353840 Query 22989 AAACGCCCGATTG-TACAA-CAA---ACTTGTTGACG------------GCGATCGAGGC 23031 || | | || || ||| | ||| | || | | | || || ||||| Sbjct 353839 AA--GTCTGAGTGGTACCATCAAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGC 353782 Query 23032 AAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATT 23091 | || || || || || || ||| | | ||| || ||||| || ||| | || Sbjct 353781 CAAGTTACAAACAGCAACTTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTT 353722 Query 23092 GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTT-TCGATTGCACGAATCCTTGT 23150 | |||| ||| | ||||| || ||||||| | || ||| || || | |||||||| Sbjct 353721 AGAAGACTTGATCATACCCAAGTTCTTCTGGTTAGTCTTCTCG-TTACAGGCATCCTTGT 353663 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | |||||| | || || || ||||| ||| | || | ||| || ||||| | | Sbjct 353662 AAAGCATGAATGGAGTACCAGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTT 353603 Query 23211 GAGCGTGAACACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTC 23268 |||| | ||| ||| | |||| ||||||| ||| ||||| | || | || | Sbjct 353602 GAGCCTTGACA-GTCTTTC-TACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT 353545 Query 23269 AAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCA 23328 ||||| |||| ||||| || || || || || | || | ||| | | | | |||| Sbjct 353544 GAATTCATCACCATAACAATCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCA 353485 Query 23329 CATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 || | |||| ||||| ||| ||| || | ||| || ||||| | || ||| Sbjct 353484 --TTCAC-CATTAGACTCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAA 353428 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || || || | | ||| ||||| ||| |||||| | | || | || || || Sbjct 353427 CAAATCACGAGCTCTGATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAA 353368 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 | || || ||||| || || | |||| |||||| || || |||||||| || || || Sbjct 353367 GATATCTGCGTGCCATGGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACC 353308 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || ||||||||||| || |||||||| | || | | ||| || | | |||||| || Sbjct 353307 TTGGTCGACGTAACGAGCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGA 353248 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | |||||| | |||| |||||| || | ||| ||||| Sbjct 353247 AGTACCGTTAGTACCAGCAATGTAAGAACCTGTAGCTCTAACGTTATGGATGTGTAAACC 353188 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || || | | || || |||| || |||||||||| ||| || ||||| ||||| Sbjct 353187 GATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTC 353128 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 |||| || ||| | | || || | |||||| || ||||| || | | || ||| | Sbjct 353127 GATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACC 353068 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 || ||||| || || ||||| || ||||||| | ||||| || || || || Sbjct 353067 AGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGT 353008 Query 23806 GTCGATGGCGGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCA 23861 || || | | | ||| | |||| || || |||||||| ||||| | ||| |||| Sbjct 353007 CTCAATAACTGATTTAATAT-CTCTACCATGGATACCGATAGCGACTCTCATGATCA 352952 >seq6 Length=680632 Score = 127 bits (140), Expect = 2e-24 Identities = 314/471 (67%), Gaps = 4/471 (1%) Strand=Plus/Minus Query 23097 ACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCA 23156 |||| || || |||||||| |||| || || |||| ||| || | |||||| ||||||| Sbjct 464880 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 464821 Query 23157 TGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT 23216 || | || || || || || || || || | ||| | |||| | ||||||| | Sbjct 464820 TGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCTGAGCCT 464761 Query 23217 GAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCG 23275 || | || | || ||||| | ||| || || || |||| ||||||| Sbjct 464760 TAAT-CTTCTTCTTTGCCAATCCTTCCTTCTCATATTTGTGATACAGTTGAACAAATTCT 464702 Query 23276 GCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGA 23334 |||| || || || || || | | |||| |||| | | | ||| | Sbjct 464701 TCACCATACACCTCATTCAAACCAGGAGCAT-CATCTGGACTAAACAAGCACCATTCTTC 464643 Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394 || || ||||| | ||| || ||||| || ||||||||||| || |||| || || Sbjct 464642 ATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAATCACG 464583 Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454 || | || ||| || || || ||||| | || | || || |||| ||| || || Sbjct 464582 AGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAATCCATCACATCAGC 464523 Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514 |||||| || || | || | |||||| || || ||||||||||| || || ||||| || Sbjct 464522 ATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAAC 464463 Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || | || ||||| || ||||||| ||||| || |||| |||||| || Sbjct 464462 ATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGA 464412 >seq5 Length=1064489 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| || || || || || |||| |||||| | || Sbjct 816566 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACTATTACACTCGAGGTTGAATCCTCT 816625 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || |||| | | | ||| | | |||||||||| | || || ||||| Sbjct 816626 GACACTATTGACAACGTTAAGTCTAAGATTCAAG-ACAAGGAAGGTATTCCACCTGACCA 816684 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| || ||| | || || || ||| || ||| || || Sbjct 816685 GCAGAGACTTATCTTTGCTGGTAAGCAGCTTGAGGATGGTAGAACTTTGTCCGACTACAA 816744 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||||| || || || |||||||| |||| | ||| |||| || ||| Sbjct 816745 CATTCAGAAGGAGTCCACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 816793 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| |||| || || || || || | || ||||| | ||| Sbjct 816110 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAGACTATTACACTTGAAGTTGAGTCCTCC 816169 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | || ||||||||| || | || || |||||| Sbjct 816170 GACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 816229 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || || || ||| | ||||| | || | ||| || ||| Sbjct 816230 CAGAGACTTATTTTTGCCGGTAAGCAGCTCGAAGATGGCAGAACCCTCTCCGACTACAAC 816289 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || |||||||| |||| | ||| |||| || |||| Sbjct 816290 ATTCAGAAGGAGTCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTA 816338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766260698000