Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq6 104 5e-17 seq9 98.7 2e-15 >seq6 Length=680632 Score = 104 bits (114), Expect = 5e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 ||||||||||||| || |||||||| |||||||| |||| | || || || ||||||| Sbjct 382246 TTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTTCCTTTGCCTCTATTTTCT 382305 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | ||||| || ||| | |||| ||| | || | ||| |||||||| |||| | | Sbjct 382306 GGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTAATGAGTTGATTTGCCGTG 382365 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | |||||| | || |||||||| || || |||| Sbjct 382366 ATGAAGGTTTGCACACTGACTTTGCCTGTTTGTTGTT 382402 >seq9 Length=581722 Score = 98.7 bits (108), Expect = 2e-15 Identities = 187/270 (69%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||| | ||| | |||| || ||||| ||||||||||| | || | || | ||| Sbjct 353202 ATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGATCAAGGCACATTGTTTCAAAGT 353143 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 ||||| |||||||| ||| ||| ||| | ||| |||||| || ||||| | || Sbjct 353142 CTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCACAAGGAAACAAGAGGACATCTG 353083 Query 94893 -GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTC- 94950 ||||||| || ||| || |||| || || ||||| ||||| || || | ||| Sbjct 353082 TGGGTGTG-GGGTACCAGCGTTGAACAAAGTTGGAGAAGCGTGGGTGAAGTA-TCTCTCA 353025 Query 94951 GACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCC 95010 |||||||| | ||| || ||||| || ||||| || ||| || || || |||| ||| Sbjct 353024 GACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCTACCATGGATACCGATAGCG 352965 Query 95011 ACACGCATAATCATGTCCTGAGGGCGCTCA 95040 || | ||| |||| | ||| || || ||| Sbjct 352964 ACTCTCATGATCAAATGCTGTGGACGTTCA 352935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583683023875