Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq9 277 2e-69 seq6 192 7e-44 >seq9 Length=581722 Score = 277 bits (306), Expect = 2e-69 Identities = 1318/2072 (64%), Gaps = 42/2072 (2%) Strand=Plus/Minus Query 62042 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62100 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 354715 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 354656 Query 62101 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62160 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 354655 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 354596 Query 62161 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62220 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 354595 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 354536 Query 62221 TTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62279 ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 354535 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 354477 Query 62280 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCA 62336 |||| ||||| || || ||||| || || ||| || || | |||| || Sbjct 354476 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 354417 Query 62337 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAAT 62396 |||| ||| | || ||| | | ||| | || |||||||| | |||||| Sbjct 354416 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 354357 Query 62397 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62456 || |||| | || | |||| |||||| ||| || || ||||| | | || || Sbjct 354356 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 354297 Query 62457 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62516 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 354296 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 354237 Query 62517 AGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG--TA 62574 | |||||| | || | | | || ||| ||||||| ||| | ||| || || | Sbjct 354236 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 354177 Query 62575 CAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62634 | | | | || || ||| ||| || || ||| ||| | Sbjct 354176 CTTC--CCCAAAGGTCAAACTGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 354119 Query 62635 CATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGG 62694 | ||||| ||||| || || || | | | | ||| || ||| ||| |||||||| Sbjct 354118 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 354059 Query 62695 TTTCAAAGATCTTCTTATTTAGATCTTGTGC-TTCCGGGCTATCAAATGGATAATTTAAG 62753 | || ||||||| | || | || | || || | | |||||||| || || Sbjct 354058 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGAT-TCAAATGGCAAACGCAAA 354000 Query 62754 AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62813 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 353999 ATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATTG 353940 Query 62814 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT---T 62870 ||| || ||||||||| | || || || ||| || || ||| | || | || | Sbjct 353939 GAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTTT 353880 Query 62871 CTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC-CCATCT 62924 |||||| || | ||||| | | |||| | | || | | | ||||| Sbjct 353879 GTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATCA 353820 Query 62925 A------TTACAAACAT-GTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCA 62975 | || ||| | | | |||||||| || |||| ||||| || || || || Sbjct 353819 AGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTCT 353760 Query 62976 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035 | | || | |||| | |||||| || | ||| | ||||||| | || || Sbjct 353759 TCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAAG 353700 Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095 || | || ||| |||| | |||||| |||||||| ||||| ||||||||||||||||| Sbjct 353699 TTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGTC 353640 Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63155 ||| |||| | || | || || | ||| | | ||||||| | | ||| || Sbjct 353639 TCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTAC 353582 Query 63156 CTC--CTTTCTCTTTCGTATAGAGTATACA-ATCGTTCGAACTCGTCTCCCCAAACATTG 63212 | | | |||| | || || ||| | | | || ||| || || || || || Sbjct 353581 CACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAACAATCA 353523 Query 63213 TCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 63272 | | | || ||||| ||| | | ||| | ||| || || | | || || ||| Sbjct 353522 GCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGACTCAACACGT 353463 Query 63273 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCG 63332 | ||| || | |||||| ||||| | ||| || | ||| | | ||| || || Sbjct 353462 TCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTTCT 353403 Query 63333 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63392 || || ||||||| ||| |||| ||| | | ||||| | ||||| |||||||| Sbjct 353402 TTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAAA 353343 Query 63393 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63452 || | ||| | | ||||| | ||||| || || || || | ||| | ||| ||||| Sbjct 353342 TAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTG 353283 Query 63453 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAG 63512 ||| | || | | ||||||||| | |||||| || |||| || ||||| | || || Sbjct 353282 TTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTAA 353223 Query 63513 CCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63572 || | || | || ||| || || ||| || || || || | || ||||| Sbjct 353222 GAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGATC 353163 Query 63573 AATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGT 63632 || || ||| |||| || || |||||||| || || ||| ||| || |||| | Sbjct 353162 AAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCACA 353103 Query 63633 AGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63692 || ||||| ||||| || | | | || || || || || || || ||||||||| Sbjct 353102 AGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGCG 353043 Query 63693 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63752 || || || || | ||||| | || || || ||||||||| |||| | ||||| | Sbjct 353042 TGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCTA 352983 Query 63753 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTG 63812 ||| || || | ||||| | ||| | || ||||| || | |||| | | ||| Sbjct 352982 CCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTACCA 352923 Query 63813 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63870 || | ||||||||| ||| | ||||| || || |||||||| ||||| || ||||| Sbjct 352922 TTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGAAA 352863 Query 63871 AGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCA 63930 |||| ||||| || || | || | | || || || | | | ||| || | || Sbjct 352862 --TCTCTATCGTAGATGATGGCAGAGTCCAACTCGTCTTTGAACTCTTGAACAATGT-CA 352806 Query 63931 TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 63989 | | ||| || | ||||||||||| | | || || |||| |||||| | Sbjct 352805 TAAGTTTCCTTAGACAACATCGGAGAATGGAGATCGGTCTTTGGGTTAATGTAGTTGTAA 352746 Query 63990 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCT 64049 | || || | || | || |||| | |||| ||| || | ||| || ||||| Sbjct 352745 AGCTCTTCGACAACAGAAGAGAACTGTTTAGTGGTTTGCTTATGCAAATTAGAGATGGCA 352686 Query 64050 ATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 ||||| || |||| | | ||||| || ||||| Sbjct 352685 ATTCTAGCAGCTAAAGTAGCATAGTCTGGATG 352654 >seq6 Length=680632 Score = 192 bits (212), Expect = 7e-44 Identities = 425/627 (68%), Gaps = 8/627 (1%) Strand=Plus/Minus Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || | Sbjct 464880 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 464821 Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 63137 |||| ||| ||||||||||| |||||||| | || | | ||| | | || ||||| Sbjct 464820 TGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCT-GAGCC 464762 Query 63138 TTTATTATAGA-TTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTC 63196 || || | |||| ||||| || | || ||| ||||| | | | || || Sbjct 464761 TTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATTTGTGATACAGTTGAACAAATTC 464703 Query 63197 GTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCC 63256 || || | || | | ||| | |||| ||||| |||| | ||| |||| ||| | Sbjct 464702 TTCACCATACACCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTTC 464643 Query 63257 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63316 || | || ||| || ||| || ||||| || ||||| ||||| ||| | ||| | Sbjct 464642 ATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAATCACG 464583 Query 63317 TGTTCTATGTTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATATCAG 63375 | ||| || || ||||| |||||| ||||| | || || |||| | ||||| Sbjct 464582 AGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAAT-CCATCACATCAG 464524 Query 63376 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63435 |||||| |||||||| || ||||| | | || || | || || || || ||||| | Sbjct 464523 CATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCAA 464464 Query 63436 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCAT 63495 ||||| |||||||||||| | ||||| | ||| || | ||||||||||| |||||| Sbjct 464463 CATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCAT 464404 Query 63496 TGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCC 63555 | | |||| || || | ||| |||| | ||| || || |||||| || || | Sbjct 464403 TTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATGTAGACCGATACCAC 464344 Query 63556 CTGCCATTTTAGAGATTAATGC-GCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTA 63614 | || || |||||||| || | | | | || || | ||| ||||| || ||| Sbjct 464343 CAGCAGCCTTCGAGATTAAAGCAGTCTTG-TGCAAAGTCTTATATATGCCATCGATGGAG 464285 Query 63615 TCATCGATCATGTTAAGTAGAAAACAG 63641 ||||| || |||||| |||||| Sbjct 464284 TCATCTTCTATTCCAAGTAGGAAACAG 464258 Score = 188 bits (208), Expect = 9e-43 Identities = 410/608 (67%), Gaps = 12/608 (2%) Strand=Plus/Minus Query 33564 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623 ||||| ||||| |||||| || || || ||||| ||| || || | | ||| || Sbjct 382411 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 382352 Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 || ||||| || || | || ||||| | || | ||| || | ||| || || || || Sbjct 382351 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 382292 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743 || || || || |||||||| ||||| || || |||||||||| ||||||||| || | Sbjct 382291 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 382232 Query 33744 CCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 382231 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 382172 Query 33801 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33860 || || || ||||||||||| | ||| | | | ||| || | |||||| || Sbjct 382171 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 382112 Query 33861 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33920 ||||| ||| || | || || |||||||| || || || || || ||||||||| Sbjct 382111 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 382052 Query 33921 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCA 33978 || |||| || | ||| ||||| || | | | || ||||| | || || ||||| | Sbjct 382051 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAA--GTTCTCAACCAAGTTCTCATTAA 381994 Query 33979 CTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTAT-AAAATATTTTTCGTCT 34037 | || || ||| || ||||| || || | ||| | || || | | || ||| Sbjct 381993 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 381934 Query 34038 GGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 34094 | | | | || |||||||||| | ||| ||||| | ||| | || || | ||| Sbjct 381933 CAT-TCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTC 381875 Query 34095 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 34154 || || || || || ||||| || || | |||||| ||||| || | |||||||||| Sbjct 381874 CAGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAA 381815 Query 34155 ATAACAAA 34162 | |||||| Sbjct 381814 AGAACAAA 381807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817403182000