Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq6 174 1e-38 seq9 138 1e-27 >seq6 Length=680632 Score = 174 bits (192), Expect = 1e-38 Identities = 315/456 (69%), Gaps = 6/456 (1%) Strand=Plus/Minus Query 37997 ACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAA 38056 |||||||||||||||| || || |||||| |||| ||| || | ||||| ||| || Sbjct 464652 ACCATTCTTCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAA 464593 Query 38057 ATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGA 38116 | ||||| | ||| ||||| || || |||||| |||||| ||| ||||| | Sbjct 464592 ACAAATCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAATCCA 464533 Query 38117 ATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTC 38176 | |||||| ||||||||||| | ||| || | | ||| |||||||| |||| ||| | Sbjct 464532 TCACATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCAC 464473 Query 38177 CCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAG 38236 | |||| || |||||| | ||||||||| | | ||| | ||||||||| ||||| || | Sbjct 464472 CTTGATCAACATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTG 464413 Query 38237 ATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATC 38296 | | || ||| |||| || || | ||| | |||| || || ||| | | Sbjct 464412 AAGTACCATTTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATGTAGAC 464353 Query 38297 CTATTCCACCTGCATGTTTTGATATTAAAGC-GCATTGTTTTAACGTATCAAATATACCT 38355 | || ||||| ||| || || |||||||| | ||| | || || | | |||| || Sbjct 464352 CGATACCACCAGCAGCCTTCGAGATTAAAGCAGTCTTG-TGCAAAGTCTTATATATGCCA 464294 Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACA--ACTAGACATTTGAGGCAATGGAG 38413 || || |||||| | |||| |||| ||||| | ||| || | || ||| | Sbjct 464293 TCGATGGAGTCATCTTCTATTCCAAGTAGGAAACAGGATGAGAGATAT--GGAGTTGGTG 464236 Query 38414 TTCCGGCGTTAAATAATGTAGGAGATGCATGTATGA 38449 | || | ||| |||| ||| || |||||||| |||| Sbjct 464235 TACCAGAGTTGAATAGTGTTGGTGATGCATGGATGA 464200 Score = 149 bits (164), Expect = 6e-31 Identities = 400/607 (66%), Gaps = 10/607 (2%) Strand=Plus/Minus Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671 ||||| ||||| ||||| ||||| ||| || |||||||| || | | || | Sbjct 382411 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 382352 Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731 |||||||| || || || || |||||||| |||| || || | ||| || |||| ||| Sbjct 382351 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 382292 Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT 11791 || |||||||| ||||| || || || ||||| ||||| || || | ||| || || | Sbjct 382291 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 382232 Query 11792 AC--CTTGTTGCTAGATA-TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC 11848 | ||| || | | | ||||| | ||||||||||| ||||| || | ||| Sbjct 382231 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 382172 Query 11849 ATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATATT--ATCTCTTACATATGTAT 11906 || || || || || ||||| |||| | | || | | ||| | | ||| || | Sbjct 382171 ATAGTCTCAATGGCATTAAACAAAT--ACTCAGCCTGTTGTGGATCCTTGATATAAGTGT 382114 Query 11907 CTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGA 11966 | || || | | || | || || ||||| || ||||| ||||| || || |||| Sbjct 382113 CAATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGA 382054 Query 11967 AACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTA 12026 |||| || |||| | || || || || | || | || | || |||||||| | Sbjct 382053 AACACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAA 381994 Query 12027 CAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTT 12086 | ||||| ||| || ||||| || || || | | | || ||| | ||| | | Sbjct 381993 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 381934 Query 12087 TAGTTAAT---TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCC 12143 | | ||| || | |||||||| ||||| || || ||||| | || ||| |||||| Sbjct 381933 CATTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCC 381874 Query 12144 AAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAA 12203 | ||| || | | | || || | |||||| ||||| ||||| || ||||||| Sbjct 381873 AGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAA 381814 Query 12204 TAACGAA 12210 ||| || Sbjct 381813 GAACAAA 381807 >seq9 Length=581722 Score = 138 bits (152), Expect = 1e-27 Identities = 407/623 (65%), Gaps = 6/623 (1%) Strand=Plus/Minus Query 38014 TCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTA 38073 || || |||||||| || |||||||| | ||| ||||| | || ||||| | ||| Sbjct 353471 TCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTG 353412 Query 38074 TATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCAT 38133 ||||| || || ||||||||| | | | ||||| || ||||| ||||||||| Sbjct 353411 ATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCAT 353352 Query 38134 GGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTA 38193 ||||| | ||||| | | ||| || ||||| || | ||| || || | | || | | Sbjct 353351 GGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGA 353292 Query 38194 ACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCG 38253 | ||||| ||| | | | | ||| || | | ||| ||||| | ||||| |||| Sbjct 353291 GCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCA 353232 Query 38254 GATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGT 38313 | || |||| ||| |||||| | ||| || || || || ||||| || Sbjct 353231 GCAATGTAAGAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTC 353172 Query 38314 TTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTT 38373 || || || || || |||||||| || || ||| | ||||| || || || || | Sbjct 353171 TTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTC 353112 Query 38374 ATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTA 38433 || | | | |||||| ||||| || || ||| || || ||||| || || || Sbjct 353111 ATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTT 353052 Query 38434 GGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCT 38493 ||||| || || |||| || | || |||| ||||| || || || || | || | Sbjct 353051 GGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAAC-TGATTT 352993 Query 38494 -ATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTAT 38552 ||||| | || || ||||| | || || ||||| | || ||| ||||| | ||| Sbjct 352992 AATATCTCTACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGC 352933 Query 38553 TATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACT 38612 | |||| ||| | | || ||| | || ||||| || | ||||| || | Sbjct 352932 GACTTTACCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTT 352873 Query 38613 ATA--TGAATAATCTCTATCGTA 38633 ||| ||| ||||||||||||| Sbjct 352872 ATAGTTGA--AATCTCTATCGTA 352852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524653586000