Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 174 1e-38
seq9 138 1e-27
>seq6
Length=680632
Score = 174 bits (192), Expect = 1e-38
Identities = 315/456 (69%), Gaps = 6/456 (1%)
Strand=Plus/Minus
Query 37997 ACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAA 38056
|||||||||||||||| || || |||||| |||| ||| || | ||||| ||| ||
Sbjct 464652 ACCATTCTTCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAA 464593
Query 38057 ATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGA 38116
| ||||| | ||| ||||| || || |||||| |||||| ||| ||||| |
Sbjct 464592 ACAAATCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAATCCA 464533
Query 38117 ATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTC 38176
| |||||| ||||||||||| | ||| || | | ||| |||||||| |||| ||| |
Sbjct 464532 TCACATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCAC 464473
Query 38177 CCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAG 38236
| |||| || |||||| | ||||||||| | | ||| | ||||||||| ||||| || |
Sbjct 464472 CTTGATCAACATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTG 464413
Query 38237 ATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATC 38296
| | || ||| |||| || || | ||| | |||| || || ||| | |
Sbjct 464412 AAGTACCATTTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATGTAGAC 464353
Query 38297 CTATTCCACCTGCATGTTTTGATATTAAAGC-GCATTGTTTTAACGTATCAAATATACCT 38355
| || ||||| ||| || || |||||||| | ||| | || || | | |||| ||
Sbjct 464352 CGATACCACCAGCAGCCTTCGAGATTAAAGCAGTCTTG-TGCAAAGTCTTATATATGCCA 464294
Query 38356 TCTATACTGTCATCCTTTATTGGTAGTATAAAACA--ACTAGACATTTGAGGCAATGGAG 38413
|| || |||||| | |||| |||| ||||| | ||| || | || ||| |
Sbjct 464293 TCGATGGAGTCATCTTCTATTCCAAGTAGGAAACAGGATGAGAGATAT--GGAGTTGGTG 464236
Query 38414 TTCCGGCGTTAAATAATGTAGGAGATGCATGTATGA 38449
| || | ||| |||| ||| || |||||||| ||||
Sbjct 464235 TACCAGAGTTGAATAGTGTTGGTGATGCATGGATGA 464200
Score = 149 bits (164), Expect = 6e-31
Identities = 400/607 (66%), Gaps = 10/607 (2%)
Strand=Plus/Minus
Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGT 11671
||||| ||||| ||||| ||||| ||| || |||||||| || | | || |
Sbjct 382411 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 382352
Query 11672 TCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA 11731
|||||||| || || || || |||||||| |||| || || | ||| || |||| |||
Sbjct 382351 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 382292
Query 11732 AATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT 11791
|| |||||||| ||||| || || || ||||| ||||| || || | ||| || || |
Sbjct 382291 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 382232
Query 11792 AC--CTTGTTGCTAGATA-TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC 11848
| ||| || | | | ||||| | ||||||||||| ||||| || | |||
Sbjct 382231 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 382172
Query 11849 ATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTATATT--ATCTCTTACATATGTAT 11906
|| || || || || ||||| |||| | | || | | ||| | | ||| || |
Sbjct 382171 ATAGTCTCAATGGCATTAAACAAAT--ACTCAGCCTGTTGTGGATCCTTGATATAAGTGT 382114
Query 11907 CTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGA 11966
| || || | | || | || || ||||| || ||||| ||||| || || ||||
Sbjct 382113 CAATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGA 382054
Query 11967 AACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTA 12026
|||| || |||| | || || || || | || | || | || |||||||| |
Sbjct 382053 AACACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAA 381994
Query 12027 CAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTT 12086
| ||||| ||| || ||||| || || || | | | || ||| | ||| | |
Sbjct 381993 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 381934
Query 12087 TAGTTAAT---TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCC 12143
| | ||| || | |||||||| ||||| || || ||||| | || ||| ||||||
Sbjct 381933 CATTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCC 381874
Query 12144 AAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAA 12203
| ||| || | | | || || | |||||| ||||| ||||| || |||||||
Sbjct 381873 AGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAA 381814
Query 12204 TAACGAA 12210
||| ||
Sbjct 381813 GAACAAA 381807
>seq9
Length=581722
Score = 138 bits (152), Expect = 1e-27
Identities = 407/623 (65%), Gaps = 6/623 (1%)
Strand=Plus/Minus
Query 38014 TCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTA 38073
|| || |||||||| || |||||||| | ||| ||||| | || ||||| | |||
Sbjct 353471 TCAACACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTG 353412
Query 38074 TATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCAT 38133
||||| || || ||||||||| | | | ||||| || ||||| |||||||||
Sbjct 353411 ATCTCTTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCAT 353352
Query 38134 GGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTA 38193
||||| | ||||| | | ||| || ||||| || | ||| || || | | || | |
Sbjct 353351 GGTTCCAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGA 353292
Query 38194 ACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCG 38253
| ||||| ||| | | | | ||| || | | ||| ||||| | ||||| ||||
Sbjct 353291 GCAGTGTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCA 353232
Query 38254 GATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGT 38313
| || |||| ||| |||||| | ||| || || || || ||||| ||
Sbjct 353231 GCAATGTAAGAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTC 353172
Query 38314 TTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTT 38373
|| || || || || |||||||| || || ||| | ||||| || || || || |
Sbjct 353171 TTGGAGATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTC 353112
Query 38374 ATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTA 38433
|| | | | |||||| ||||| || || ||| || || ||||| || || ||
Sbjct 353111 ATAGCCACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTT 353052
Query 38434 GGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCT 38493
||||| || || |||| || | || |||| ||||| || || || || | || |
Sbjct 353051 GGAGAAGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAAC-TGATTT 352993
Query 38494 -ATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTAT 38552
||||| | || || ||||| | || || ||||| | || ||| ||||| | |||
Sbjct 352992 AATATCTCTACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGC 352933
Query 38553 TATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACT 38612
| |||| ||| | | || ||| | || ||||| || | ||||| || |
Sbjct 352932 GACTTTACCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTT 352873
Query 38613 ATA--TGAATAATCTCTATCGTA 38633
||| ||| |||||||||||||
Sbjct 352872 ATAGTTGA--AATCTCTATCGTA 352852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524653586000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |