Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq9 288 1e-72 seq6 179 5e-40 >seq9 Length=581722 Score = 288 bits (318), Expect = 1e-72 Identities = 1208/1891 (64%), Gaps = 48/1891 (3%) Strand=Plus/Minus Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 354715 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 354656 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 354655 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 354596 Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 354595 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 354536 Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 65072 ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 354535 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 354477 Query 65073 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 65129 |||| ||||| || || ||||| || || ||| | || || | |||| || Sbjct 354476 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 354417 Query 65130 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 65189 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 354416 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 354357 Query 65190 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 65249 || |||| | || | |||| |||||| ||| || || ||||| | | | || || Sbjct 354356 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 354297 Query 65250 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 65309 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 354296 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 354237 Query 65310 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 65367 | |||||| | || | | | || |||| ||||||| ||| | ||| || || | Sbjct 354236 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 354177 Query 65368 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 65427 | | || || ||| ||| || || ||| ||| | Sbjct 354176 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 354119 Query 65428 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 65487 ||||||| ||||| || || || ||| | | ||| || ||| ||| |||||||| Sbjct 354118 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 354059 Query 65488 TTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGGATAATTTAA 65545 | |||||||||| | || | || | || || ||| | ||||||| || || Sbjct 354058 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 354001 Query 65546 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 65605 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 354000 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 353941 Query 65606 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT--- 65662 ||| || ||||||||| | || || || ||| || || ||| | || | || Sbjct 353940 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 353881 Query 65663 TCTGACAA--TT---ACTTTGACCACATCCTTCA---------GTTTGAG----AAAATC 65704 | |||||| || | ||||| | | |||| || |||| | ||| Sbjct 353880 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 353821 Query 65705 AAATCGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTAC 65764 || | || || | || || |||||||| || |||| |||||||| || || Sbjct 353820 AAGGGATTTTTCAATGA--AAGCTGG-CAATGCAATGGAGGCCAAGTTACAAACAGCAAC 353764 Query 65765 CTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCC 65824 || | | || | |||| | |||||| || | ||| | ||||||| | || Sbjct 353763 TTCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACC 353704 Query 65825 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 65884 || || | || ||| |||| | |||||| |||||||| ||||| |||||||||||||| Sbjct 353703 CAAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACC 353644 Query 65885 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 65944 ||| ||| |||| | || | || || | ||| | | ||||||| | | ||| Sbjct 353643 AGTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTT 353586 Query 65945 GTATCTCTTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCGAACTCGTCTCCCCAAAC 66001 || | | |||||| ||| | ||| | | | || ||| || || || || Sbjct 353585 CTACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAACA 353527 Query 66002 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 66061 || | | || || ||||| ||| | | ||| | ||| || || | | || || Sbjct 353526 ATCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGACTCAAC 353467 Query 66062 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTC 66121 |||| ||| || | |||||| ||||| | ||| || ||||| | | ||| || Sbjct 353466 ACGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTC 353407 Query 66122 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTC 66181 || || || ||||||| ||| |||| ||| | | ||||| ||||| ||||| Sbjct 353406 TTCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTC 353347 Query 66182 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 66241 ||| || | ||| | | ||||| | ||||| || || || || | ||| | ||| || Sbjct 353346 CAAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGT 353287 Query 66242 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 66301 ||| ||| | || | | ||||||||| | ||| || || ||||| || || || | || Sbjct 353286 GTTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAAT 353227 Query 66302 ATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 66361 || || | || | || ||| || || ||| || || || || | || || Sbjct 353226 GTAAGAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGA 353167 Query 66362 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 66421 ||| || || ||| |||| || || |||||||| ||||| || ||| || |||| Sbjct 353166 GATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGC 353107 Query 66422 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 66481 | || ||||| ||||| || | | || || || || || || || ||||| Sbjct 353106 CACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGA 353047 Query 66482 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC 66541 |||||| || || || | ||||| | || || || ||||||||| |||| | ||||| Sbjct 353046 AGCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATC 352987 Query 66542 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 66601 | ||| || || | ||||| | ||| | || ||||| || | |||| ||| || Sbjct 352986 TCTACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTT 352927 Query 66602 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 66659 || | ||||||||| ||| | ||||| || || |||||||| ||||| || | Sbjct 352926 ACCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTT 352867 Query 66660 GAAAAGTCTCGTTCGTAAATAATAACCGAGT 66690 |||| |||| ||||| || || | |||| Sbjct 352866 GAAA--TCTCTATCGTAGATGATGGCAGAGT 352838 >seq6 Length=680632 Score = 179 bits (198), Expect = 5e-40 Identities = 406/607 (67%), Gaps = 10/607 (2%) Strand=Plus/Minus Query 36140 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 36199 ||||| ||||| |||||| || || || ||| | ||| || || | | ||| || Sbjct 382411 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 382352 Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259 || || || || || | || ||||| | || | ||| || | ||| || || || ||| Sbjct 382351 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 382292 Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 36319 || || ||||| ||||| || ||||| || || |||||||||| ||||||||| || | Sbjct 382291 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 382232 Query 36320 CCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 36376 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 382231 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 382172 Query 36377 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 36436 || ||||| || |||||||| | ||| | | | ||| || | ||| || ||| Sbjct 382171 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 382112 Query 36437 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 36496 ||||| ||| || | || || |||||||| || || ||||| || ||||||||| Sbjct 382111 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 382052 Query 36497 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCA 36554 || |||| || | ||| || || || | | | || ||||| | || || ||||| | Sbjct 382051 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAA--GTTCTCAACCAAGTTCTCATTAA 381994 Query 36555 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTG 36614 | || |||||| || ||||| || || | ||| | || || | ||| || Sbjct 381993 CGATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCT 381934 Query 36615 GTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCC 36671 | | | || |||||||||| | ||| ||||| | ||| | || || | |||| Sbjct 381933 CATTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCC 381874 Query 36672 AAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAA 36731 | || || || || ||||| || || | |||||| ||||| || | ||||| |||| Sbjct 381873 AGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAA 381814 Query 36732 TAACAAA 36738 |||||| Sbjct 381813 GAACAAA 381807 Score = 179 bits (198), Expect = 5e-40 Identities = 384/563 (68%), Gaps = 8/563 (1%) Strand=Plus/Minus Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || | Sbjct 464880 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 464821 Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 65930 |||| ||| ||||||||||| |||||||| | || | | ||| | | || ||||| Sbjct 464820 TGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCT-GAGCC 464762 Query 65931 TTTATTATAGA-TTTGTATCTCTTTTCTCTTTCGTATAGTGT-ATACAATCGTTCGAACT 65988 || || | |||| || || || | || ||| ||| ||||| | | | || | Sbjct 464761 TTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATT-TGTGATACAGTTGAACAAATT 464704 Query 65989 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 66048 | || || | || | | ||| |||||| ||||| |||| | ||| |||| ||| Sbjct 464703 CTTCACCATACACCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTT 464644 Query 66049 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTC 66108 | || | || ||| || ||| || ||||| || ||||| ||||| ||| ||||| | Sbjct 464643 CATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAATCAC 464584 Query 66109 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATATCA 66167 | ||| || || ||||| |||||| ||||| | || || |||| | |||| Sbjct 464583 GAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAAT-CCATCACATCA 464525 Query 66168 TAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 66227 |||||| |||||||| || ||||| | | || || | || || || || ||||| Sbjct 464524 GCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCA 464465 Query 66228 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCA 66287 | ||||| |||||||||||| | ||||| | ||| || | ||||| || || |||||| Sbjct 464464 ACATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCA 464405 Query 66288 TTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCC 66347 || | |||| || || ||| | || | ||| || || |||||| || || Sbjct 464404 TTTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATGTAGACCGATACCA 464345 Query 66348 CCTGCCATTTTAGAGATTAATGC 66370 || || || |||||||| || Sbjct 464344 CCAGCAGCCTTCGAGATTAAAGC 464322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172594321000