Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq9 333 4e-86 seq6 201 2e-46 >seq9 Length=581722 Score = 333 bits (368), Expect = 4e-86 Identities = 1336/2075 (64%), Gaps = 48/2075 (2%) Strand=Plus/Minus Query 78714 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 354715 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 354656 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 78832 | | ||| |||| |||||||| |||||| || | || | | ||| || Sbjct 354655 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 354596 Query 78833 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 78892 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 354595 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 354536 Query 78893 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 78951 ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 354535 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 354477 Query 78952 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCT 79008 |||| ||||| || || ||||| || || ||| | || || | |||| || Sbjct 354476 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 354417 Query 79009 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 79068 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 354416 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 354357 Query 79069 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTA 79128 || |||| | || | |||| |||||| ||| || |||||||| | |||| || Sbjct 354356 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 354297 Query 79129 TTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTA 79188 | ||||| ||||||| ||| || || |||||||| || || || | ||| ||||| Sbjct 354296 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 354237 Query 79189 AGACCGTA--TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGA 79246 | |||||| ||| || | | | || |||| ||||||||||| | ||| || || Sbjct 354236 AAACCGTACTTGACA--ATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGG-- 354181 Query 79247 CAACATTCC--AAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGT 79304 | |||| |||| ||| | || || ||| ||| ||| || ||| | ||| Sbjct 354180 CTTTCTTCCCCAAAGGTCAAACTGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGA 354121 Query 79305 TTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAAT 79364 ||| || || ||||| | ||| | ||| | | ||| || || ||| |||||| Sbjct 354120 TTCGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAAT 354061 Query 79365 GGTTTCGAAAATCTTCTTATTGAGATCTTGTGC-TTCTAGGCTATCAAATGGATAATTTA 79423 ||| ||||| |||| | || | || | || || | | | |||||||| || | Sbjct 354060 GGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGAT-TCAAATGGCAAACGCA 354002 Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483 | | ||||| || || ||||| ||||||||||| | | || ||||| | |||| ||| Sbjct 354001 AAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATAT 353942 Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543 | || || ||||||||| | || || || ||| || || ||| | || | ||| Sbjct 353941 TGGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCT 353882 Query 79544 T---GACTA--TT---ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGT-CCAT 79594 | ||| | || | ||||| | | || | | | || | | || |||| Sbjct 353881 TTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCAT 353822 Query 79595 CTA------TTACAAACAT-GTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCT 79645 | | || ||| | | | ||| || | || |||| |||||||| || || | Sbjct 353821 CAAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTT 353762 Query 79646 CATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTA 79705 | | | || | |||| | || ||| || | |||| | |||| || | || | Sbjct 353761 CTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCA 353702 Query 79706 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAG 79765 | || | || ||| |||| | |||||| |||||||| ||||| ||||| |||||||||| Sbjct 353701 AGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAG 353642 Query 79766 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTG- 79824 | ||| |||| | || | || || | ||| | | ||||||| | || ||| Sbjct 353641 TCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGAC---AGTCTTTC 353585 Query 79825 TATCTCTT--TTCTCTTTCGTATTGTGTATATA-ATCGTTCGAACTCGTCTCCCCAAACA 79881 || | | |||| | || || | ||| | | | || ||| || || || || | Sbjct 353584 TACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAACAA 353526 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 || | | || || ||| | ||| | | ||| | ||| || |||| | || || Sbjct 353525 TCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGACTCAACA 353466 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 |||| ||| || | |||||| ||||| | ||| || | ||| | | ||| ||| Sbjct 353465 CGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCT 353406 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || || || ||||||| ||| |||| ||| | | ||||| | ||||| |||||| Sbjct 353405 TCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCC 353346 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 || || | ||| | | || |||| ||||| || || || || | ||| | ||| ||| Sbjct 353345 AAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTG 353286 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 || ||| | || | | ||||||||| | ||| || || ||||| || || || | || Sbjct 353285 TTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATG 353226 Query 80182 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 80241 || || | || | || ||| || || ||| || || || || | || ||| Sbjct 353225 TAAGAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAG 353166 Query 80242 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTA 80301 || || || ||| |||| || || |||||||| ||||| ||| ||| || |||| Sbjct 353165 ATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCC 353106 Query 80302 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 80361 | || ||||| ||||| || | | || || || || || || || |||||| Sbjct 353105 ACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAA 353046 Query 80362 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 80421 ||||| || || || | ||||||| || || || ||||||||| |||||| ||||| Sbjct 353045 GCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCT 352986 Query 80422 CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 80481 | ||| || || | ||||| | ||| | || ||||| || | |||| ||| || Sbjct 352985 CTACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTA 352926 Query 80482 TTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 80539 ||| | ||||||||||||| | ||||| || || |||||||| ||||| || || Sbjct 352925 CCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTG 352866 Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 80599 ||| |||| ||||| || || | |||| | | || || | | | ||| | | Sbjct 352865 AAA--TCTCTATCGTAGATGATGGCAGAGTCCAACTCGTCTTTGAACTCTTGAACAATGT 352808 Query 80600 CCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 80658 ||| | ||| || | ||||||||||| | | || || |||| |||||| Sbjct 352807 -CATAAGTTTCCTTAGACAACATCGGAGAATGGAGATCGGTCTTTGGGTTAATGTAGTTG 352749 Query 80659 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 80718 | | || || | || | || |||| | |||| ||| || | ||| || | | Sbjct 352748 TAAAGCTCTTCGACAACAGAAGAGAACTGTTTAGTGGTTTGCTTATGCAAATTAGAGATG 352689 Query 80719 GCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || ||||| || |||||| | ||||| |||||||| Sbjct 352688 GCAATTCTAGCAGCTAAAGTAGCATAGTCTGGATG 352654 >seq6 Length=680632 Score = 201 bits (222), Expect = 2e-46 Identities = 411/608 (68%), Gaps = 12/608 (2%) Strand=Plus/Minus Query 49942 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 50001 ||||| ||||| |||||| || || || ||||| ||| || || | | ||| | Sbjct 382411 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 382352 Query 50002 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 50061 || || || || || | || ||||| | || | ||| || | ||| || || || ||| Sbjct 382351 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 382292 Query 50062 AATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAA 50121 || || ||||| |||||||| ||||| || ||||||||||||||||||||||| || | Sbjct 382291 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 382232 Query 50122 CTGGCGCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 50178 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 382231 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 382172 Query 50179 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 50238 || || || ||||||||||| | ||| | | | ||| || | |||||| || Sbjct 382171 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 382112 Query 50239 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 50298 ||||| ||| || | || || |||||||| || || || || || ||||||||| Sbjct 382111 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 382052 Query 50299 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACT 50358 || |||| || | ||| ||||| || | | | || ||| | || || ||||| || Sbjct 382051 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACG 381992 Query 50359 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATG---TTTTATAAAATGT---TTTTCG 50412 || |||||| || ||||| || || | ||| | | | ||| || || || Sbjct 381991 ATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCA 381932 Query 50413 TTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTC 50472 || | | || |||||||||| | ||| ||||| | ||| | || || | ||| Sbjct 381931 TTCAATCT---GTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTC 381875 Query 50473 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 50532 || || || || || ||||| || || | |||||| ||||| || | |||||||||| Sbjct 381874 CAGAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAA 381815 Query 50533 ATAACAAA 50540 | |||||| Sbjct 381814 AGAACAAA 381807 Score = 192 bits (212), Expect = 8e-44 Identities = 473/704 (67%), Gaps = 10/704 (1%) Strand=Plus/Minus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 || ||||| |||| ||||||||||| ||| | || | ||||| | | |||| Sbjct 464956 GCAACAGAGGCCAAGTTACAAACGGCAGTCTCTTCAGGTGATGAGTATTGAACCACTTCA 464897 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 || | ||| |||| || || || ||||| | |||||||||||| | ||||| Sbjct 464896 CAACACAAGTTCGAGGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAA 464837 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 ||||||||||| || ||||| ||| ||||||||||| |||||||| | || | | | Sbjct 464836 GCATCCTTATAGAGCATGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGC 464777 Query 79795 CAGA-CGACTCGAGCCTTTATTATAGACTT-GTATCTCTTTTCTCTTTCGTATTGTGT-A 79851 || | | || ||||||| || | ||| | || || || | || |||| ||| | Sbjct 464776 CATAACTTCT-GAGCCTTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATT-TGTGA 464720 Query 79852 TATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACAC 79911 || | | | | || || || || | || || | || |||||| || || |||| Sbjct 464719 TACAGTTGAACAAATTCTTCACCATACACCTCATTCAAACCAGGAGCATCATCTGGACTA 464660 Query 79912 ATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 79971 | ||| |||| ||| |||| | || ||| || ||| || ||||| || ||||| ||| Sbjct 464659 AACAAGCACCATTCTTCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGA 464600 Query 79972 GCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAG 80030 || ||| | ||| | | ||| ||| || ||||| |||||| ||||| | || Sbjct 464599 GCATAAAACAAATCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAG 464540 Query 80031 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTT 80090 || |||| | ||||| |||||| |||||||| || ||||| | | || |||| || Sbjct 464539 AAAT-CCATCACATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTT 464481 Query 80091 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 80150 || || || ||||| | ||||| |||||||||||| | ||||| | ||| || | || Sbjct 464480 ATTACCACCTTGATCAACATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGAT 464421 Query 80151 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 80210 ||| || || |||||||| | |||| || || ||| |||| | ||| || || Sbjct 464420 ACCGTTTGAAGTACCATTTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATAT 464361 Query 80211 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC-GCATCGTTTTAACGTATCAT 80269 |||||| || || || || || |||||||| || | | | | || || | || Sbjct 464360 ATGTAGACCGATACCACCAGCAGCCTTCGAGATTAAAGCAGTCTTG-TGCAAAGTCTTAT 464302 Query 80270 AGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAG 80313 | ||||| || ||| ||||| || |||||| |||||| Sbjct 464301 ATATGCCATCGATGGAGTCATCTTCTATTCCAAGTAGGAAACAG 464258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268575541000