Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq6 143 3e-29 >seq6 Length=680632 Score = 143 bits (158), Expect = 3e-29 Identities = 470/723 (65%), Gaps = 8/723 (1%) Strand=Plus/Minus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 |||||||| ||| |||||| || |||||||||||||| ||||| ||| || || || Sbjct 382684 TTTTGATAATCAGAAACTCTCTTCTCAAAGAAGTTAGTCTTACCAGCCAAGGAAATGTTC 382625 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699 |||||||| || ||||| || | || | | | || | ||| || | | || Sbjct 382624 TCCATAAAGTCGAATGGGTT-AGAAACGTTGTAGAACTTCTTGTTACCAAGGGCAATAAG 382566 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 | | ||||||| |||| || |||||| ||| | | |||||||| | | Sbjct 382565 AAGACGATCAGCACAGAACTGAACGTATTGAACCATAAGCTTGGCGTTCATACCGAGCAA 382506 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 | |||| || ||| || | || ||| || ||||| || | ||||| Sbjct 382505 AGAAGCTGGAAGAGCATCGGTAAAGTACTCAGATTCAATCTCAACAGCTTCAGTAATAAT 382446 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 | | ||||||| ||| || | || | ||| ||| | ||||| ||||| Sbjct 382445 CTTCTCCACAATCTCAGAAGATGGCTTGTTCTTCAAATGAGCAAACAACAAACAGGCAAA 382386 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 ||| || | || ||||| | | ||| | || || || || || || |||||||| Sbjct 382385 GTCAGTGTGCAAACCTTCATCACGGCAAATCAACTCATTAGAGAAAGTCAAACCTGGCAT 382326 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999 ||| |||| || || ||||| || || | ||||| || || || ||||| || || || Sbjct 382325 CAAACCTCTCTTCTTCAACCAGAAAATAGAGGCAAAGGAACCAGAGAAGAAGATACCTTC 382266 Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14059 ||| || ||||| || | | || || || ||| | |||| || | | |||||| | Sbjct 382265 AACAGCGGCAAAGGCAACAAGTCTCTCACCGAACAAGGCTTCTTCATCGGCAATCCATCT 382206 Query 14060 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATA 14119 |||||| |||| || || |||||| | || || ||||| |||||||| ||||| Sbjct 382205 CAAAGCCCAATCAGCCTTCTTCTTAATACATGGAATAGTCTCAATGGCATTAAACAAATA 382146 Query 14120 TTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT-AAGTAAGCTATACATTTCAGA 14176 || || || | | |||| || || || ||||| ||| || || | ||||| Sbjct 382145 CTCAGCCTGTTGTGGATCCTTG--ATATAAGTGTCAATCAAGAGAG-AGTATGTCTCAGA 382089 Query 14177 GTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTAC 14236 ||| ||||| ||||| || || ||||| || || || ||||||| | ||| || Sbjct 382088 GTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGCAC 382029 Query 14237 TTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14296 || | | || | || |||| || |||||||| ||||| ||| ||| ||||| || Sbjct 382028 CTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACGATACCGTCAGAAGCGGCAAAGAA 381969 Query 14297 TGC 14299 || Sbjct 381968 GGC 381966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727850085000