Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq9 230 3e-55 seq6 190 3e-43 >seq9 Length=581722 Score = 230 bits (254), Expect = 3e-55 Identities = 1310/2075 (63%), Gaps = 48/2075 (2%) Strand=Plus/Minus Query 70797 CAAT-GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTT 70855 |||| || |||||||| | || || || || | || | | ||||||||| || || | Sbjct 354715 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 354656 Query 70856 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCG 70914 | | ||| |||| ||||| || |||||| || | || |||| | ||| | Sbjct 354655 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTT-GGAGCT 354597 Query 70915 GCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 70974 |||||||| |||| || ||| |||||| ||||| || | | || |||||||| Sbjct 354596 CTAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATA 354537 Query 70975 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTC 71033 | ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| Sbjct 354536 TCGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT- 354478 Query 71034 TGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTC 71090 ||||| ||||| || || ||||| || || ||| | || || | | || || Sbjct 354477 TGGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGA 354418 Query 71091 TTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAA 71150 |||| ||| | || ||| | | ||| | || || ||||| | || || Sbjct 354417 GTCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAA 354358 Query 71151 TTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATT 71210 ||| |||| | || | ||||| |||||| ||| || || ||||| | | || || Sbjct 354357 TTCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTT 354298 Query 71211 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCT 71270 | ||||| ||||||| ||| || ||||| ||||| || || || | | | ||||| Sbjct 354297 GTAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCT 354238 Query 71271 AAGACCATG--TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG- 71327 | ||| | ||| || | | | || |||| ||||||| ||| | ||| || || Sbjct 354237 CAAACCGTACTTGACA--ATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGC 354180 Query 71328 -TACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATG 71386 | | | | || ||| ||| || ||| ||| Sbjct 354179 TTTCTTCCCCAAAGGTCAAACTGAAGCTGA--CCCTTAGAAGCTGGGGAACCTTGGAATG 354122 Query 71387 TATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAA 71446 |||||||| ||||| | ||| || ||| | | ||| || || | | ||||| Sbjct 354121 ATTCGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAA 354062 Query 71447 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGC-TTCCGGGCTATCAAATGGATAATTT 71505 |||| ||||| |||| | || | || | || || | | |||||||| || Sbjct 354061 TGGTCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGAT-TCAAATGGCAAACGC 354003 Query 71506 AAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTA 71565 || | ||||| || || ||||| |||||||| || | | || ||||||| |||| || Sbjct 354002 AAAATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATA 353943 Query 71566 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT- 71624 || || || ||||||||| | || || || ||| || || ||| | || | || Sbjct 353942 TTGGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTC 353883 Query 71625 --TCTGACTA--TT---ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC-TCCCA 71676 | |||| | || | ||||| | | || | | | || | | | ||| Sbjct 353882 TTTGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCA 353823 Query 71677 TCTA------TTACAAACAC-GTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACC 71727 || | || ||| | | | ||| |||| || |||| |||||||| || || Sbjct 353822 TCAAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACT 353763 Query 71728 TCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCT 71787 || | | || | |||| | ||| ||| || | ||| | ||||||| | || Sbjct 353762 TCTTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCC 353703 Query 71788 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCA 71847 || || | || ||| |||| | |||||| |||||||| ||||| || || ||||||||| Sbjct 353702 AAGTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCA 353643 Query 71848 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTG 71907 || ||| |||| | || | || || | ||| | | ||||||| | | || | Sbjct 353642 GTCTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTCTT--TC 353585 Query 71908 TATCTCTT--TTCTCTTTCGTATTGTGTATATA-ATCGTTCGAACTCGTCTCCCCAAGCA 71964 || | | |||| | || || | ||| | | | || ||| || || || || | Sbjct 353584 TACCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAACAA 353526 Query 71965 TTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACT 72024 | | | || || |||||| ||| | | ||| | ||| || |||| | | || Sbjct 353525 TCAGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGACTCAACA 353466 Query 72025 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 72084 |||| ||| || | |||||| ||||| | ||| || | ||| | | ||| ||| Sbjct 353465 CGTTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCT 353406 Query 72085 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 72144 || || || ||||||| ||| |||| ||| | | ||||| | ||||| |||||| Sbjct 353405 TCTTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCC 353346 Query 72145 AAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 72204 || || | ||| | | || || | ||||| || || || || | ||| | ||| ||| Sbjct 353345 AAATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTG 353286 Query 72205 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 72264 || ||| | || | | ||||||||| | ||| || || | ||| || || || | || Sbjct 353285 TTGTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATG 353226 Query 72265 TAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 72324 || || | || | || || || || ||| || || || || | || ||| Sbjct 353225 TAAGAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAG 353166 Query 72325 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 72384 || || || ||| |||| || || |||||||| ||||| || ||| || |||| Sbjct 353165 ATCAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCC 353106 Query 72385 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 72444 | || ||||| ||||| || | | || || || || || || || |||||| Sbjct 353105 ACAAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAA 353046 Query 72445 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 72504 ||||| || || || | ||||||| || || || ||||||||| |||||| ||||| Sbjct 353045 GCGTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCT 352986 Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 | ||| || || | ||||| | ||| | || |||||| || | |||| ||| || Sbjct 352985 CTACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTA 352926 Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 72622 ||| | ||||||||| ||| | ||||| || || |||||||| ||||| || || Sbjct 352925 CCATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTG 352866 Query 72623 AAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATAT 72682 ||| |||| ||||| || || | || | | | || || | | | ||| || | Sbjct 352865 AAA--TCTCTATCGTAGATGATGGCAGAGTCCAACTCGTCTTTGAACTCTTGAACAATGT 352808 Query 72683 CCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 72741 ||| | ||| || | ||||||||||| | | || || |||| |||||| Sbjct 352807 -CATAAGTTTCCTTAGACAACATCGGAGAATGGAGATCGGTCTTTGGGTTAATGTAGTTG 352749 Query 72742 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 72801 | | || || | || | || |||| | |||| ||| || | ||| || | | Sbjct 352748 TAAAGCTCTTCGACAACAGAAGAGAACTGTTTAGTGGTTTGCTTATGCAAATTAGAGATG 352689 Query 72802 GCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 || ||||| || |||| | | ||||| |||||||| Sbjct 352688 GCAATTCTAGCAGCTAAAGTAGCATAGTCTGGATG 352654 >seq6 Length=680632 Score = 190 bits (210), Expect = 3e-43 Identities = 406/605 (67%), Gaps = 6/605 (1%) Strand=Plus/Minus Query 42047 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAAT 42106 ||||| ||||| |||||| || || || ||||| ||| ||||| | | ||| || Sbjct 382411 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 382352 Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 || || || || || | || ||||| | || | ||| || | ||| || ||||| ||| Sbjct 382351 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 382292 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 42226 || || ||||| |||||||| ||||| || || |||||||||| ||||||||| || | Sbjct 382291 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 382232 Query 42227 CCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 42283 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 382231 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 382172 Query 42284 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCG 42343 || || || ||||||||||| | ||| | | | ||| || | ||| || || Sbjct 382171 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 382112 Query 42344 ATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 42403 ||||| ||| || | || || |||||||| || || || || || ||||||||| Sbjct 382111 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 382052 Query 42404 CATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACT 42463 || | || || | || || || || | | | || ||| | || || || || || Sbjct 382051 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACG 381992 Query 42464 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGT 42523 || |||||| || ||||| || || | ||| | || || | ||| | | Sbjct 381991 ATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCA 381932 Query 42524 GTTAAT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAA 42580 | ||| || |||||||||| | ||| ||||| | ||| | || || | ||||| Sbjct 381931 TTCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCAG 381872 Query 42581 AATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATA 42640 || || ||||| ||||| || || | |||||| ||||| || | |||||||||| | Sbjct 381871 AAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAAGA 381812 Query 42641 ACAAA 42645 ||||| Sbjct 381811 ACAAA 381807 Score = 178 bits (196), Expect = 2e-39 Identities = 610/928 (66%), Gaps = 40/928 (4%) Strand=Plus/Minus Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493 || |||| ||| |||||||| || |||| | || || | | || | ||||| ||| Sbjct 465238 GCACCATGATACATGGTTTCAAAGATCTCTCTGTTAAGTTTGCGAGCCTTAGGGCTGTCA 465179 Query 71494 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGG 71552 ||||| ||| | |||| || || | | || | ||||||||| |||||| | || || Sbjct 465178 AATGGCAAATGGA-GAGACATGAATAAGCCAGCAAGTCCTTGAACTCCAATAGCAATTGG 465120 Query 71553 TCTGTGTCTC---TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 71609 | |||| || ||| | || || || ||||| | || || | || ||| || Sbjct 465119 ACGGTGTTTCAAGTTACTTGAC---TCCGCCTCTGGTGTTGGGTAGATACCAACATCGAT 465063 Query 71610 AATTTTATTGAGATTTCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAG------AA 71662 || || || ||||| || | | | ||||||||| ||| | || || | || Sbjct 465062 AACCTTGTTCAGATT-CTTAGTCAATACTTTGACGACAGAGTGTAACTTTTGGTGATCAA 465004 Query 71663 AATCAA-------ATC----TCCCATCTATTACAAACACGTTC-AAG-GCAACAGATGCC 71709 || ||| ||| || | || || ||| | ||| ||| |||||||| ||| Sbjct 465003 AAACAAGTTCATTATCAACTTCACTTCGTTT-CAAGAAAGTTGGAAGAGCAACAGAGGCC 464945 Query 71710 AGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTA 71769 | ||||||||||| ||| | || | ||||| | | |||| || | || Sbjct 464944 AAGTTACAAACGGCAGTCTCTTCAGGTGATGAGTATTGAACCACTTCACAACACAAGTTC 464885 Query 71770 CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 71829 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| Sbjct 464884 GAGGACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAG 464825 Query 71830 AGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCG 71888 || || || ||| ||||||||||| |||||||| | || | | ||| | | || | Sbjct 464824 AGCATGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCT-G 464766 Query 71889 AGCCTTTATTATATTCTT-GTATCTCTTTTCTCTTTCGTATTGTGT-ATATAATCGTTCG 71946 |||||| || | ||||| | || || || | || |||| ||| ||| | | | | Sbjct 464765 AGCCTTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATT-TGTGATACAGTTGAACA 464708 Query 71947 AACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCAC 72006 || || || || | | | | || |||||| |||| |||| | ||| |||| Sbjct 464707 AATTCTTCACCATACACCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCAT 464648 Query 72007 TCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 72066 ||| |||| | | ||| || ||| || ||||| || ||||| ||||| ||| | | Sbjct 464647 TCTTCATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAA 464588 Query 72067 TCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAAT 72125 || | | ||| ||| || ||||| |||||| ||||| | || || |||| | Sbjct 464587 TCACGAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAAT-CCATCAC 464529 Query 72126 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTG 72185 ||||| |||||| |||||||| || ||||| | | || || | || || || || || Sbjct 464528 ATCAGCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTG 464469 Query 72186 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 72245 ||| | ||||| |||||||||||| | ||||| | ||| || | ||||| || || | Sbjct 464468 ATCAACATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGT 464409 Query 72246 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT-ATTGCTAATTGATAGACCTA 72304 |||||| | |||| || || ||| |||| | ||| | | || || |||||| | Sbjct 464408 ACCATTTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATG-TAGACCGA 464350 Query 72305 TTCCCCCTGCCATTTTAGAGATTAATGC 72332 | || || || || |||||||| || Sbjct 464349 TACCACCAGCAGCCTTCGAGATTAAAGC 464322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138990269000