Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6 170 3e-37
seq13 111 2e-19
seq9 109 8e-19
>seq6
Length=680632
Score = 170 bits (188), Expect = 3e-37
Identities = 393/584 (67%), Gaps = 15/584 (3%)
Strand=Plus/Plus
Query 124998 TTTCCCA-TCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTG 125056
||||||| ||| ||| ||||| || ||| | ||||| |||||| | || || || ||
Sbjct 381815 TTTCCCAATCAAGTACCATGAGATCTGGCAGGCATACAAGAAGGCTGAAGCTTCTTTCTG 381874
Query 125057 GACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGA 125116
||| | || ||| | ||| |||| ||||| || | |||||| | | | |||| |||
Sbjct 381875 GACCGCTGAGGAGATTGATTTGTCTAAGGATTTGCATGATTGGAACAACAGATTGAATGA 381934
Query 125117 AACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGT 125176
| ||| || || || || | || | ||||||||||||| || || || |||||
Sbjct 381935 GAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTATCGT 381994
Query 125177 CAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCT 125235
|| || || | ||||| | |||||| ||| || |||||||| | ||| |
Sbjct 381995 TAATGAGAACTTGGTTGAGA-ACTTCTCTGCCGAGGTGCAAATTCCAGAAGCTAAGTGTT 382053
Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295
| ||||| |||||||||||||| |||||| | ||||| || | |||||| ||||||
Sbjct 382054 TCTACGGTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGATTG 382113
Query 125296 ACATGTACATTCGCGATCCGCAAC---GTAAACACATGCTCTTTAACGCAATCGACACGG 125352
||| || || ||||| |||| | | | || ||||| || || || ||
Sbjct 382114 ACACTTATATCAAGGATCCACAACAGGCTGAGTATTTG---TTTAATGCCATTGAGACTA 382170
Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT---CGATGACGACAAGT 125409
| || | ||| || |||||| | |||| | | ||||| |||||| | |||
Sbjct 382171 TTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGA--AGAAGC 382228
Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469
||| || || || ||||| || || || ||||| || || || |||||||| || |||
Sbjct 382229 CTT-GTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTT 382287
Query 125470 GTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTA 125529
||||| | || || ||| | |||||| | || | ||||| || |||| | ||
Sbjct 382288 CCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTA 382347
Query 125530 ACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573
| ||||| || | || || || || | ||| ||||||||||
Sbjct 382348 ATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCC 382391
>seq13
Length=262405
Score = 111 bits (122), Expect = 2e-19
Identities = 359/553 (65%), Gaps = 26/553 (5%)
Strand=Plus/Minus
Query 69868 TCGGTACTCGTTGAGGGACAACAACCTACCTCTGTTGACGACCAAGACTGTCTTTGTCAA 69927
||| | ||| |||| ||| ||| | || ||||| ||||| |||| ||||| ||
Sbjct 259910 TCGTTTCTCCTTGAAGGATGACACTTTCCCACTGTTAACGACTAAGAAGGTCTTCACTAA 259851
Query 69928 GGGCGTCATCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTGAG 69987
||| ||||| ||| || |||||| | ||| |||| | || ||| || |||| ||
Sbjct 259850 GGGTATCATCTTGGAACTATTGTGGTTTATTGCCGGCTGCACTGATGGTAAGAAGCTCAG 259791
Query 69988 CCGAAAGGGTGTACACATTTGGAGCGGCAACAGTAGTCGAAGCGTTT---TGGATTCGCT 70044
| | || || | |||||| || || | || ||| | | | ||| ||
Sbjct 259790 TGAACAAGGAGTGAAGATTTGGGAAGGTAATGGA--TC-AAGAGAATACCTCGATAGTCT 259734
Query 70045 CGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCA 70104
|| || ||||| | | || || ||| | || ||||| || || ||||| ||||| ||
Sbjct 259733 TGGATTAACCGATCGTCGTGAAGGTGATTTAGGTCCAGTTTATGGTTTCCAATGGAGACA 259674
Query 70105 CTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA-T 70163
|| || | |||| |||||| || | ||||| |||| ||||||||||||||| |
Sbjct 259673 CTTTGGTGCTGAGTACAAAGACTGTGATGCTGACTACACGGGCCAGGGTGTTGATCAACT 259614
Query 70164 TGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCT 70223
|| || | | || | | | ||||| || ||| ||||| || ||| | ||| |
Sbjct 259613 CGCTGA-AGTGATCCATAAGTTGAAGACAAACCCATACGATAGAAGAATCATTATGAGTG 259555
Query 70224 CATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGT 70283
| |||||||| |||| || | | |||||| ||||||| ||||| ||| |||| |
Sbjct 259554 CTTGGAATCCACCAGACTTCCCAAAGATGGCATTACCACCATGTCATGTTTTTTCTCAAT 259495
Query 70284 T---------TTACTCGTACGATGG--------CA-AATTGTCATGCTTAATGTATCAGA 70325
| || | | | ||||| || || | || || ||| |||||||||
Sbjct 259494 TCTATGTCAATTTCCCAAAGGATGGTGGTAAGCCACAACTATCTTGTTTACTGTATCAGA 259435
Query 70326 GGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGC 70385
| || ||||| |||||||| || ||||||||||| || || | |||||
Sbjct 259434 GATCATGTGATATGGGTCTCGGTGTTCCATTTAACATTGCCTCATACGCTCTCTTGACAA 259375
Query 70386 ACATGATTGCTCA 70398
| |||||||| ||
Sbjct 259374 AGATGATTGCACA 259362
>seq9
Length=581722
Score = 109 bits (120), Expect = 8e-19
Identities = 312/464 (67%), Gaps = 22/464 (5%)
Strand=Plus/Plus
Query 97772 GTACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGT 97831
|||||||||||||||||||||||| || || || ||||| || || | ||||| ||| |
Sbjct 354228 GTACGGTTTGAGAAACTCTTTGCTTGTTGCTCCAATGCCAACTGCCTCGACTTCTCAAAT 354287
Query 97832 GTTTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCA 97891
|| || | |||| ||| ||||| | ||| || ||||| ||| | || ||
Sbjct 354288 CTTGGGTTACAACGAATGTTTCGAACCATACACTTCTAACATTTACTCTCGTCGTGTCCT 354347
Query 97892 GTCTGGAGAGTTTCA-ATTGACCAACGTGCACTTGGTTCGAGACTTGGAACGGCTCAATC 97950
|||| || || || |||| ||| | ||| |||| || |||| | |
Sbjct 354348 TGCTGGTGAATTCCAGATTGTT-AACCCATATTTGCTTCGTGATTTGGTTGATTTGGGTG 354406
Query 97951 TGTGGAACGATGAC---ATGGCCCAGTTG-ATCATGTACAACAATGGGTCCATTCAAAAC 98006
| ||| |||||| ||| ||| ||||| | | || || || |||||||||
Sbjct 354407 TTTGG---GATGACTCTATGAAG-AGTCACATCATCTCTGATAACGGTTCTATTCAAAAC 354462
Query 98007 ATTACCAT-CATCCCGGAAGAGTTGCGCAGAATC-TACAAGACTGTCTGGGAGATTCCGA 98064
|||||| ||| || | || ||| ||| | |||||||| || ||||||||| |
Sbjct 354463 -TTACCAAACATTCCAAAGGAATTGAA-AGATTTGTACAAGACCGTTTGGGAGATTTCTC 354520
Query 98065 CCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGT 98124
||||| | |||||||||||||| || | | || | |||||| || |||||| |
Sbjct 354521 AAAAGACTATCATCGATATGGCTGCTGATCGTGCTGCTTTCATTGATCAATCTCAATCTT 354580
Query 98125 TCAATCTGTACGTTGCCGAGC-CCACCTACAGTCGTA---TGACTTCGATACACTTTTAC 98180
| || | || || |||| ||| ||| | ||| |||| || || ||||| |||
Sbjct 354581 TGAACATTCACATT--AGAGCTCCAACTATGG--GTAAGTTGACCTCTATGCACTTCTAC 354636
Query 98181 GCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224
| ||||| ||||| | ||||| || ||||||||| |||||||
Sbjct 354637 GGTTGGAAGAAGGGTTTGAAGACTGGTATGTACTATTTGAGAAC 354680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058968419000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |