Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6 170 3e-37 seq13 111 2e-19 seq9 109 8e-19 >seq6 Length=680632 Score = 170 bits (188), Expect = 3e-37 Identities = 393/584 (67%), Gaps = 15/584 (3%) Strand=Plus/Plus Query 124998 TTTCCCA-TCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTG 125056 ||||||| ||| ||| ||||| || ||| | ||||| |||||| | || || || || Sbjct 381815 TTTCCCAATCAAGTACCATGAGATCTGGCAGGCATACAAGAAGGCTGAAGCTTCTTTCTG 381874 Query 125057 GACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGA 125116 ||| | || ||| | ||| |||| ||||| || | |||||| | | | |||| ||| Sbjct 381875 GACCGCTGAGGAGATTGATTTGTCTAAGGATTTGCATGATTGGAACAACAGATTGAATGA 381934 Query 125117 AACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGT 125176 | ||| || || || || | || | ||||||||||||| || || || ||||| Sbjct 381935 GAATGAACGTTTCTTCATCTCTCGTGTTCTTGCCTTCTTTGCCGCTTCTGACGGTATCGT 381994 Query 125177 CAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCT 125235 || || || | ||||| | |||||| ||| || |||||||| | ||| | Sbjct 381995 TAATGAGAACTTGGTTGAGA-ACTTCTCTGCCGAGGTGCAAATTCCAGAAGCTAAGTGTT 382053 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 | ||||| |||||||||||||| |||||| | ||||| || | |||||| |||||| Sbjct 382054 TCTACGGTTTCCAAATCATGATGGAGAACATTCACTCTGAGACATACTCTCTCTTGATTG 382113 Query 125296 ACATGTACATTCGCGATCCGCAAC---GTAAACACATGCTCTTTAACGCAATCGACACGG 125352 ||| || || ||||| |||| | | | || ||||| || || || || Sbjct 382114 ACACTTATATCAAGGATCCACAACAGGCTGAGTATTTG---TTTAATGCCATTGAGACTA 382170 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGAT---CGATGACGACAAGT 125409 | || | ||| || |||||| | |||| | | ||||| |||||| | ||| Sbjct 382171 TTCCATGTATTAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCCGATGA--AGAAGC 382228 Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469 ||| || || || ||||| || || || ||||| || || || |||||||| || ||| Sbjct 382229 CTT-GTTCGGTGAGAGACTTGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCTGGTT 382287 Query 125470 GTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTA 125529 ||||| | || || ||| | |||||| | || | ||||| || |||| | || Sbjct 382288 CCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCTA 382347 Query 125530 ACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 | ||||| || | || || || || | ||| |||||||||| Sbjct 382348 ATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTGACTTTGCC 382391 >seq13 Length=262405 Score = 111 bits (122), Expect = 2e-19 Identities = 359/553 (65%), Gaps = 26/553 (5%) Strand=Plus/Minus Query 69868 TCGGTACTCGTTGAGGGACAACAACCTACCTCTGTTGACGACCAAGACTGTCTTTGTCAA 69927 ||| | ||| |||| ||| ||| | || ||||| ||||| |||| ||||| || Sbjct 259910 TCGTTTCTCCTTGAAGGATGACACTTTCCCACTGTTAACGACTAAGAAGGTCTTCACTAA 259851 Query 69928 GGGCGTCATCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTGAG 69987 ||| ||||| ||| || |||||| | ||| |||| | || ||| || |||| || Sbjct 259850 GGGTATCATCTTGGAACTATTGTGGTTTATTGCCGGCTGCACTGATGGTAAGAAGCTCAG 259791 Query 69988 CCGAAAGGGTGTACACATTTGGAGCGGCAACAGTAGTCGAAGCGTTT---TGGATTCGCT 70044 | | || || | |||||| || || | || ||| | | | ||| || Sbjct 259790 TGAACAAGGAGTGAAGATTTGGGAAGGTAATGGA--TC-AAGAGAATACCTCGATAGTCT 259734 Query 70045 CGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCA 70104 || || ||||| | | || || ||| | || ||||| || || ||||| ||||| || Sbjct 259733 TGGATTAACCGATCGTCGTGAAGGTGATTTAGGTCCAGTTTATGGTTTCCAATGGAGACA 259674 Query 70105 CTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA-T 70163 || || | |||| |||||| || | ||||| |||| ||||||||||||||| | Sbjct 259673 CTTTGGTGCTGAGTACAAAGACTGTGATGCTGACTACACGGGCCAGGGTGTTGATCAACT 259614 Query 70164 TGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCT 70223 || || | | || | | | ||||| || ||| ||||| || ||| | ||| | Sbjct 259613 CGCTGA-AGTGATCCATAAGTTGAAGACAAACCCATACGATAGAAGAATCATTATGAGTG 259555 Query 70224 CATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGT 70283 | |||||||| |||| || | | |||||| ||||||| ||||| ||| |||| | Sbjct 259554 CTTGGAATCCACCAGACTTCCCAAAGATGGCATTACCACCATGTCATGTTTTTTCTCAAT 259495 Query 70284 T---------TTACTCGTACGATGG--------CA-AATTGTCATGCTTAATGTATCAGA 70325 | || | | | ||||| || || | || || ||| ||||||||| Sbjct 259494 TCTATGTCAATTTCCCAAAGGATGGTGGTAAGCCACAACTATCTTGTTTACTGTATCAGA 259435 Query 70326 GGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGC 70385 | || ||||| |||||||| || ||||||||||| || || | ||||| Sbjct 259434 GATCATGTGATATGGGTCTCGGTGTTCCATTTAACATTGCCTCATACGCTCTCTTGACAA 259375 Query 70386 ACATGATTGCTCA 70398 | |||||||| || Sbjct 259374 AGATGATTGCACA 259362 >seq9 Length=581722 Score = 109 bits (120), Expect = 8e-19 Identities = 312/464 (67%), Gaps = 22/464 (5%) Strand=Plus/Plus Query 97772 GTACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGT 97831 |||||||||||||||||||||||| || || || ||||| || || | ||||| ||| | Sbjct 354228 GTACGGTTTGAGAAACTCTTTGCTTGTTGCTCCAATGCCAACTGCCTCGACTTCTCAAAT 354287 Query 97832 GTTTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCA 97891 || || | |||| ||| ||||| | ||| || ||||| ||| | || || Sbjct 354288 CTTGGGTTACAACGAATGTTTCGAACCATACACTTCTAACATTTACTCTCGTCGTGTCCT 354347 Query 97892 GTCTGGAGAGTTTCA-ATTGACCAACGTGCACTTGGTTCGAGACTTGGAACGGCTCAATC 97950 |||| || || || |||| ||| | ||| |||| || |||| | | Sbjct 354348 TGCTGGTGAATTCCAGATTGTT-AACCCATATTTGCTTCGTGATTTGGTTGATTTGGGTG 354406 Query 97951 TGTGGAACGATGAC---ATGGCCCAGTTG-ATCATGTACAACAATGGGTCCATTCAAAAC 98006 | ||| |||||| ||| ||| ||||| | | || || || ||||||||| Sbjct 354407 TTTGG---GATGACTCTATGAAG-AGTCACATCATCTCTGATAACGGTTCTATTCAAAAC 354462 Query 98007 ATTACCAT-CATCCCGGAAGAGTTGCGCAGAATC-TACAAGACTGTCTGGGAGATTCCGA 98064 |||||| ||| || | || ||| ||| | |||||||| || ||||||||| | Sbjct 354463 -TTACCAAACATTCCAAAGGAATTGAA-AGATTTGTACAAGACCGTTTGGGAGATTTCTC 354520 Query 98065 CCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGT 98124 ||||| | |||||||||||||| || | | || | |||||| || |||||| | Sbjct 354521 AAAAGACTATCATCGATATGGCTGCTGATCGTGCTGCTTTCATTGATCAATCTCAATCTT 354580 Query 98125 TCAATCTGTACGTTGCCGAGC-CCACCTACAGTCGTA---TGACTTCGATACACTTTTAC 98180 | || | || || |||| ||| ||| | ||| |||| || || ||||| ||| Sbjct 354581 TGAACATTCACATT--AGAGCTCCAACTATGG--GTAAGTTGACCTCTATGCACTTCTAC 354636 Query 98181 GCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224 | ||||| ||||| | ||||| || ||||||||| ||||||| Sbjct 354637 GGTTGGAAGAAGGGTTTGAAGACTGGTATGTACTATTTGAGAAC 354680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058968419000