Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 3e-15 seq16 91.5 1e-13 >seq5 Length=1064489 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||| || ||||| ||||| || || || |||||||| ||| Sbjct 816336 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 816277 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | || || || || | || | | || ||||| |||| Sbjct 816276 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGA 816217 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || ||||| ||| ||| ||| || | || || || ||| || || Sbjct 816216 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACT 816157 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| || ||||| |||| || || || |||||||||||| Sbjct 816156 TCAAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCATA 816109 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || ||||| ||||| || || || |||||||| ||| Sbjct 816792 CCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 816733 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | || || | || || ||||| | || | | || ||||| |||| Sbjct 816732 AAAGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGA 816673 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| || ||| || | || || || || ||| || Sbjct 816672 ATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACC 816613 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| || ||||| |||| || || ||||| || |||||| Sbjct 816612 TCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATA 816565 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||| || |||||||| || || || || |||||||| ||| Sbjct 816564 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 816505 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | || || || || | || | | || ||||| ||| Sbjct 816504 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 816445 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || ||||| || || ||| || | || || |||||| || || Sbjct 816444 ATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACC 816385 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| || ||||| |||| || || ||||| || |||||| Sbjct 816384 TCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATA 816337 >seq16 Length=161790 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| | || || ||||||||||| || || || |||||||| || Sbjct 4572 CCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 4513 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | || || | || || || || | || | | || ||||| ||| Sbjct 4512 AGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 4453 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| || ||| ||| ||| | || || || ||| | || || Sbjct 4452 ATACCTTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACC 4393 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || || ||||| ||||| || || || || ||||| || ||||| || Sbjct 4392 TCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 4343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179089648525