Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq5 104 2e-17 seq16 86.0 5e-12 >seq5 Length=1064489 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || || |||| ||| | || |||||||| ||||| ||||| || | Sbjct 816336 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 816277 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| || | || || ||||| ||||| ||| |||||||||||||||| || || Sbjct 816276 AGGGTTCTGCCATCTTCGAGCTGCTTACCGGCAAAAATAAGTCTCTGCTGGTCAGGTGGA 816217 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||| ||||| ||| || || || | | | | ||| ||| | ||| | Sbjct 816216 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACT 816157 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||| || ||||| || || || || || ||||||||||| Sbjct 816156 TCAAGTGTAATAGTCTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 816110 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || || |||| ||| | || |||||||| ||||| ||||| || | Sbjct 816564 CCACCTCTCAATCTCAAAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 816505 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || || ||||| ||||| ||| | |||||||||||||| || || Sbjct 816504 AGGGTTCTACCATCTTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 816445 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||| ||||| || || || || | | | | ||||||| | ||| Sbjct 816444 ATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCGGAGGACTCAACC 816385 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||| ||||| || ||||| || || || |||||||| || ||||| Sbjct 816384 TCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816338 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || ||||||| ||| | || |||||||| ||||| ||||| || | | Sbjct 816792 CCACCTCTCAATCTCAACACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 816733 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | ||||| ||||| ||||| ||| | |||||||||||||| || || Sbjct 816732 AAAGTTCTACCATCCTCAAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGGA 816673 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| ||| || || || | | | | ||| || | || Sbjct 816672 ATACCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCAATAGTGTCAGAGGATTCAACC 816613 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||| ||||| || ||||| || || || |||||||| || ||||| Sbjct 816612 TCGAGTGTAATAGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 816566 >seq16 Length=161790 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || | ||||| ||| | || |||||||| ||||| ||||| || | Sbjct 4572 CCACCTCTCAATCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 4513 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | ||||| ||||| ||||| ||| | |||||||||||||| || || Sbjct 4512 AGGGTTCTACCATCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCAGGTGGG 4453 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || |||||||| || || || || | | | | ||| ||| || ||| Sbjct 4452 ATACCTTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACC 4393 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | || ||||| ||||| || | || || ||||| || ||||| || Sbjct 4392 TCCAAAGTGATGGTCTTACCCGTGAGGGTCTTAACAAAGATCTGCATCTT 4343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572673684850