Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq6 226 7e-54
seq5 140 7e-28
seq7 105 2e-17
>seq6
Length=680632
Score = 226 bits (250), Expect = 7e-54
Identities = 395/567 (70%), Gaps = 16/567 (3%)
Strand=Plus/Plus
Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804
||||| |||| | |||||||| ||||| | || || | ||| ||||| | || ||
Sbjct 381849 TACAAGAAGGCTGAAGCTTCTTTCTGGACCGCTGAGGAGATTGATTTGTCTAAGGATTTG 381908
Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCG 268861
|||||||| || | || |||| ||| | || || ||| | |||||||
Sbjct 381909 CATGATTGGAACAACAGATTGAATGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCC 381968
Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921
|| ||||| | | ||| ||||||||||| || || | || ||||| |||| | |||
Sbjct 381969 TTCTTTGCCGCTTCTGACGGTATCGTTAATGAGAACTTGGTTGAGAACTTCTCTGCCGAG 382028
Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981
|| || ||||| ||||| | ||||| ||||| ||||| || || || || |||||
Sbjct 382029 GTGCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATCATGATGGAGAACATTCAC 382088
Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGA 269041
|| |||| ||| ||| || || || |||||||| | ||| | || | | | ||
Sbjct 382089 TCTGAGACATACTCTCTCTTGATTGACACTTATATCAAGGAT--CCACAACAGGCTGAG- 382145
Query 269042 CTATTTTCTT-----CTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTC 269096
||||| || | ||||| |||| ||| | | || || |||| ||||||
Sbjct 382146 -TATTTGTTTAATGCCATTGAGA-CTATTCCATGTATTAAGAAGAAGGCTGATTGGGCTT 382203
Query 269097 TGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCCGCTG 269153
||| |||||| |||| | ||||| ||| || || | ||||| ||||||||||
Sbjct 382204 TGAGATGGATTGCCGATGAAGAAGCCTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTG 382263
Query 269154 TAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCC 269213
| |||||||| ||||| || || || |||||| |||| || ||||||||||| |||||
Sbjct 382264 TTGAAGGTATCTTCTTCTCTGGTTCCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTT 382323
Query 269214 TTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCG 269273
| |||||||| || ||||||||||| || ||||| || | || |||||||| ||| |
Sbjct 382324 TGATGCCAGGTTTGACTTTCTCTAATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTG 382383
Query 269274 ACTTCGCTTGTTTATTATTTACTAATT 269300
|||| || ||||| || ||| || |||
Sbjct 382384 ACTTTGCCTGTTTGTTGTTTGCTCATT 382410
>seq5
Length=1064489
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || ||||| || || |||||||| ||||| || || || ||
Sbjct 816534 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAAGCTGCTTACCG 816475
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || ||||| || ||||| || || || || || ||||| ||||| | ||
Sbjct 816474 GCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTAGACTTA 816415
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | |||||| | || ||||| |||||||||||||||||||| | ||
Sbjct 816414 ACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTC 816355
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 816354 TTGACAAAGATCTGCAT 816338
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || ||||| || | ||||||||| || || || || || |||
Sbjct 816762 GTGGACTCCTTCTGAATGTTGTAGTCGGACAAAGTTCTACCATCCTCAAGCTGCTTACCA 816703
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || ||||| || ||||| || || ||||| || || |||||||| | ||
Sbjct 816702 GCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTA 816643
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || || | ||| ||||| |||||||||||||||||||| | ||
Sbjct 816642 ACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTC 816583
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 816582 TTGACAAAGATCTGCAT 816566
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || ||||| || || ||||| || ||||| || || || ||
Sbjct 816306 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTGCTTACCG 816247
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || ||||| || ||||| || || || || || ||||||||||| | ||
Sbjct 816246 GCAAAAATAAGTCTCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGACTTG 816187
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| | || || || |||||||||||||||||||| | ||
Sbjct 816186 ACGTTGTCAATAGTGTCGGAGGACTCAACTTCAAGTGTAATAGTCTTACCAGTCAAGGTC 816127
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 816126 TTCACGAAAATTTGCAT 816110
Score = 87.8 bits (96), Expect = 4e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || |||||||| || || || || || ||
Sbjct 816078 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTACCATCCTCAAGCTGCTTACCG 816019
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475
||||| || || ||||| |||||||| || || || || || |||||||||||
Sbjct 816018 GCAAAGATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTTGTCCTGAATCTT 815966
>seq7
Length=598726
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || || || | ||| || || || || ||||| || || ||||||
Sbjct 431679 ATACCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCA 431738
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || ||||||||||| || || || || || || || || || ||||| || |||||
Sbjct 431739 GAAAGGGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGT 431798
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || ||||| ||||| | || || || || | ||| || | ||
Sbjct 431799 GGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCA 431858
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
||||| | ||||| |||||||| ||
Sbjct 431859 ACCTCCAAGGTAATGGTCTTACCGGT 431884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398031192700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |