Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq6 226 7e-54 seq5 140 7e-28 seq7 105 2e-17 >seq6 Length=680632 Score = 226 bits (250), Expect = 7e-54 Identities = 395/567 (70%), Gaps = 16/567 (3%) Strand=Plus/Plus Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804 ||||| |||| | |||||||| ||||| | || || | ||| ||||| | || || Sbjct 381849 TACAAGAAGGCTGAAGCTTCTTTCTGGACCGCTGAGGAGATTGATTTGTCTAAGGATTTG 381908 Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCG 268861 |||||||| || | || |||| ||| | || || ||| | ||||||| Sbjct 381909 CATGATTGGAACAACAGATTGAATGAGAATGAACGTTTCTTCATCTCTCGTGTTCTTGCC 381968 Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921 || ||||| | | ||| ||||||||||| || || | || ||||| |||| | ||| Sbjct 381969 TTCTTTGCCGCTTCTGACGGTATCGTTAATGAGAACTTGGTTGAGAACTTCTCTGCCGAG 382028 Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981 || || ||||| ||||| | ||||| ||||| ||||| || || || || ||||| Sbjct 382029 GTGCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATCATGATGGAGAACATTCAC 382088 Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGA 269041 || |||| ||| ||| || || || |||||||| | ||| | || | | | || Sbjct 382089 TCTGAGACATACTCTCTCTTGATTGACACTTATATCAAGGAT--CCACAACAGGCTGAG- 382145 Query 269042 CTATTTTCTT-----CTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTC 269096 ||||| || | ||||| |||| ||| | | || || |||| |||||| Sbjct 382146 -TATTTGTTTAATGCCATTGAGA-CTATTCCATGTATTAAGAAGAAGGCTGATTGGGCTT 382203 Query 269097 TGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCCGCTG 269153 ||| |||||| |||| | ||||| ||| || || | ||||| |||||||||| Sbjct 382204 TGAGATGGATTGCCGATGAAGAAGCCTTGTTCGGTGAGAGACTTGTTGCCTTTGCCGCTG 382263 Query 269154 TAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCC 269213 | |||||||| ||||| || || || |||||| |||| || ||||||||||| ||||| Sbjct 382264 TTGAAGGTATCTTCTTCTCTGGTTCCTTTGCCTCTATTTTCTGGTTGAAGAAGAGAGGTT 382323 Query 269214 TTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCG 269273 | |||||||| || ||||||||||| || ||||| || | || |||||||| ||| | Sbjct 382324 TGATGCCAGGTTTGACTTTCTCTAATGAGTTGATTTGCCGTGATGAAGGTTTGCACACTG 382383 Query 269274 ACTTCGCTTGTTTATTATTTACTAATT 269300 |||| || ||||| || ||| || ||| Sbjct 382384 ACTTTGCCTGTTTGTTGTTTGCTCATT 382410 >seq5 Length=1064489 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || ||||| || || |||||||| ||||| || || || || Sbjct 816534 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTACCATCTTCAAGCTGCTTACCG 816475 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || ||||| || ||||| || || || || || ||||| ||||| | || Sbjct 816474 GCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTAGACTTA 816415 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | || ||||| |||||||||||||||||||| | || Sbjct 816414 ACGTTGTCAATAGTATCGGAGGACTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTC 816355 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 816354 TTGACAAAGATCTGCAT 816338 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || ||||| || | ||||||||| || || || || || ||| Sbjct 816762 GTGGACTCCTTCTGAATGTTGTAGTCGGACAAAGTTCTACCATCCTCAAGCTGCTTACCA 816703 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || ||||| || ||||| || || ||||| || || |||||||| | || Sbjct 816702 GCAAAGATAAGTCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTA 816643 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || || | ||| ||||| |||||||||||||||||||| | || Sbjct 816642 ACGTTGTCAATAGTGTCAGAGGATTCAACCTCGAGTGTAATAGTCTTACCAGTCAAGGTC 816583 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 816582 TTGACAAAGATCTGCAT 816566 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || ||||| || || ||||| || ||||| || || || || Sbjct 816306 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCGAGCTGCTTACCG 816247 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || ||||| || ||||| || || || || || ||||||||||| | || Sbjct 816246 GCAAAAATAAGTCTCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGACTTG 816187 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| | || || || |||||||||||||||||||| | || Sbjct 816186 ACGTTGTCAATAGTGTCGGAGGACTCAACTTCAAGTGTAATAGTCTTACCAGTCAAGGTC 816127 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 816126 TTCACGAAAATTTGCAT 816110 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || || |||||||| || || || || || || Sbjct 816078 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTACCATCCTCAAGCTGCTTACCG 816019 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 ||||| || || ||||| |||||||| || || || || || ||||||||||| Sbjct 816018 GCAAAGATAAGTCTCTGCTGATCAGGCGGGATACCCTCCTTGTCCTGAATCTT 815966 >seq7 Length=598726 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || || || | ||| || || || || ||||| || || |||||| Sbjct 431679 ATACCACCTCTCAATCTGAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCA 431738 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||||||||| || || || || || || || || || ||||| || ||||| Sbjct 431739 GAAAGGGTTCTACCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCAGGT 431798 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || ||||| ||||| | || || || || | ||| || | || Sbjct 431799 GGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCA 431858 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| | ||||| |||||||| || Sbjct 431859 ACCTCCAAGGTAATGGTCTTACCGGT 431884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398031192700