Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7 114 2e-21
seq1 105 1e-18
>seq7
Length=598726
Score = 114 bits (126), Expect = 2e-21
Identities = 173/245 (71%), Gaps = 1/245 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| || || ||||| |||||||||||| | | ||||| |
Sbjct 194683 AGATCT-TGAGAGATAACATTCAGGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGA 194625
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || |||||| |||||| | | || ||||| |||||| ||||||||||
Sbjct 194624 AGAGGTGGTGTTAAGCGTATCTCTGCTCTCATTTACGAAGAAGTTCGTGGTGTTTTGAAG 194565
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
|||||| | ||||| || || || || || |||||| | || | |||
Sbjct 194564 TCCTTCCTTGAACAGGTTATTAGAGACTCTGTCACTTACACTGAGCACTCCAAGAGAAAG 194505
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
||||| ||||| | ||| |||| || || ||||| | || || |||| |||| |||
Sbjct 194504 ACTGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAGGGTCGTACTCTTTACGGT 194445
Query 16688 TTTGG 16692
|| ||
Sbjct 194444 TTCGG 194440
>seq1
Length=2087116
Score = 105 bits (116), Expect = 1e-18
Identities = 174/247 (70%), Gaps = 3/247 (1%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||||| | |||||||||| || || ||||| |||||||||||| | | ||||| |
Sbjct 1420882 AGATCT-TGAGAGATAACATTCAGGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGA 1420940
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || |||||| |||||| | |||| |||||| |||||| |||||| |
Sbjct 1420941 AGAGGTGGTGTTAAGCGTATCTCTGCTCTTATCTACGAAGAGGTTCGTGGTGTTTTTGAA 1421000
Query 16568 ATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAA-ACGTA 16625
||| ||||| | ||||| ||| || || || || |||||| | || | |
Sbjct 1421001 ATCTTTCCTTGAACAAGTTATTAGAGATTCTGTCACTTACACTGAGCACTCCAAGAGAAA 1421060
Query 16626 AGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATG 16685
||||||| || || | ||| |||| || || ||||| | || || |||| |||| |
Sbjct 1421061 AGACTGTTACATCTCTCGATGTCGTTTACGCTTTGAAGAGACAGGGTCGTACTCTTTACG 1421120
Query 16686 GTTTTGG 16692
|||| ||
Sbjct 1421121 GTTTCGG 1421127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075177142325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |