Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq7 114 2e-21 seq1 105 1e-18 >seq7 Length=598726 Score = 114 bits (126), Expect = 2e-21 Identities = 173/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||||||||| || || ||||| |||||||||||| | | ||||| | Sbjct 194683 AGATCT-TGAGAGATAACATTCAGGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGA 194625 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| |||||| | | || ||||| |||||| |||||||||| Sbjct 194624 AGAGGTGGTGTTAAGCGTATCTCTGCTCTCATTTACGAAGAAGTTCGTGGTGTTTTGAAG 194565 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||||| | ||||| || || || || || |||||| | || | ||| Sbjct 194564 TCCTTCCTTGAACAGGTTATTAGAGACTCTGTCACTTACACTGAGCACTCCAAGAGAAAG 194505 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 ||||| ||||| | ||| |||| || || ||||| | || || |||| |||| ||| Sbjct 194504 ACTGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAGGGTCGTACTCTTTACGGT 194445 Query 16688 TTTGG 16692 || || Sbjct 194444 TTCGG 194440 >seq1 Length=2087116 Score = 105 bits (116), Expect = 1e-18 Identities = 174/247 (70%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||||| | |||||||||| || || ||||| |||||||||||| | | ||||| | Sbjct 1420882 AGATCT-TGAGAGATAACATTCAGGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGA 1420940 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || |||||| |||||| | |||| |||||| |||||| |||||| | Sbjct 1420941 AGAGGTGGTGTTAAGCGTATCTCTGCTCTTATCTACGAAGAGGTTCGTGGTGTTTTTGAA 1421000 Query 16568 ATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAA-ACGTA 16625 ||| ||||| | ||||| ||| || || || || |||||| | || | | Sbjct 1421001 ATCTTTCCTTGAACAAGTTATTAGAGATTCTGTCACTTACACTGAGCACTCCAAGAGAAA 1421060 Query 16626 AGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATG 16685 ||||||| || || | ||| |||| || || ||||| | || || |||| |||| | Sbjct 1421061 AGACTGTTACATCTCTCGATGTCGTTTACGCTTTGAAGAGACAGGGTCGTACTCTTTACG 1421120 Query 16686 GTTTTGG 16692 |||| || Sbjct 1421121 GTTTCGG 1421127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075177142325