Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq9 293 3e-74 seq6 194 2e-44 >seq9 Length=581722 Score = 293 bits (324), Expect = 3e-74 Identities = 1321/2073 (64%), Gaps = 44/2073 (2%) Strand=Plus/Minus Query 61991 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049 |||| ||||| ||||| | ||| || || | | || | | ||||||||| || || | Sbjct 354715 CAATAGTGAACTGAATAGCAGCAGAAGCAGCCTGGGTTCTCAAATAGTACATACCAGTCT 354656 Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62109 | | ||| |||| ||||| || |||||| || | || | | ||| || Sbjct 354655 TCAAACCCTTCTTCCAACCGTAGAAGTGCATAGAGGTCAACTTACCCATAGTTGGAGCTC 354596 Query 62110 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62169 || || || |||| ||||||| |||||| ||||| || | | || |||||||| | Sbjct 354595 TAATGTGAATGTTCAAAGATTGAGATTGATCAATGAAAGCAGCACGATCAGCAGCCATAT 354536 Query 62170 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCT 62228 ||||| |||||||| | ||| ||||||| || || || || || | ||| ||| | Sbjct 354535 CGATGATAGTCTTTTGAGAAATCTCCCAAACGGTCTTGTACAAATCTTTCAATTCCTT-T 354477 Query 62229 GGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCA 62285 |||| ||||| || || ||||| || || ||| | || || | |||| || Sbjct 354476 GGAATGTTTGGTAAGTTTTGAATAGAACCGTTATCAGAGATGATGTGACTCTTCATAGAG 354417 Query 62286 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 62345 |||| ||| | || ||| | | ||| | || || ||||| | || ||| Sbjct 354416 TCATCCCAAACACCCAAATCAACCAAATCACGAAGCAAATATGGGTTAACAATCTGGAAT 354357 Query 62346 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62405 || |||| | || | |||| |||||| ||| || || ||||| | | || || Sbjct 354356 TCACCAGCAAGGACACGACGAGAGTAAATGTTAGAAGTGTATGGTTCGAAACATTCGTTG 354297 Query 62406 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62465 | ||||| ||||||| ||| || ||||| ||||| || || || | ||| ||||| Sbjct 354296 TAACCCAAGATTTGAGAAGTCGAGGCAGTTGGCATTGGAGCAACAAGCAAAGAGTTTCTC 354237 Query 62466 AGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TA 62523 | |||||| | || | | | || |||| ||||||| ||| | ||| || || | Sbjct 354236 AAACCGTACTTGACAATATCAGCCTTAAGAGTATCCCAATCCCACAAATCGGAAGGCTTT 354177 Query 62524 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62583 | | || || ||| ||| || || ||| ||| | Sbjct 354176 CTTCCCCAAAGGTCAAAC--TGAAGCTGACCCTTAGAAGCTGGGGAACCTTGGAATGATT 354119 Query 62584 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62643 ||||||| ||||| || || || ||| | | ||| || ||| ||| |||||||| Sbjct 354118 CGTATGGACCTTCGGACTTGGCGAGCTCAAGAGAGGACTCCAAAGCAGCGTGATAAATGG 354059 Query 62644 TTTCGAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGGATAATTTAA 62701 | |||||||||| | || | || | || || ||| | ||||||| || || Sbjct 354058 TCTCGAAGATCTGAATGTTCAATTCCTTAGCCTTTTCAGATT--CAAATGGCAAACGCAA 354001 Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761 | ||||| || || ||||| ||||||||||| | | || ||||| | |||| |||| Sbjct 354000 AATCATAAAGGCATCAGCTAAACCTTGAACACCGAGGGCAATTGGTCTGTTTCTCATATT 353941 Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT--- 62818 ||| || ||||||||| | || || || ||| || || ||| | || | || Sbjct 353940 GGAGTTTCTAGCTTCTGGGACTGGGTAGTAGTTACGGTCAATGATTCTGTTCAAGTTCTT 353881 Query 62819 TCTGACAA--TT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC-CCATC 62872 | |||||| || | ||||| | | |||| | | || | | | ||||| Sbjct 353880 TGTGACAACCTTGGCAATTTGATGCAAACGTTCAAAGTTATAAGTCTGAGTGGTACCATC 353821 Query 62873 TA------TTACAAACAT-GTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 62923 | || ||| | | | ||| |||| || |||| |||||||| || || || Sbjct 353820 AAGGGATTTTTCAATGAAAGCTGGCAATGCAATGGAGGCCAAGTTACAAACAGCAACTTC 353761 Query 62924 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 62983 | | || | |||| | |||||| || | ||| | ||||||| | || || Sbjct 353760 TTCTGGGTCAGAGTATTCGACAATCTCACAACACAAGTTAGAAGACTTGATCATACCCAA 353701 Query 62984 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63043 || | || ||| |||| | |||||| |||||||| ||||| ||||||||||||||||| Sbjct 353700 GTTCTTCTGGTTAGTCTTCTCGTTACAGGCATCCTTGTAAAGCATGAATGGAGTACCAGT 353641 Query 63044 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 63103 ||| |||| | || | || || | ||| | | ||||||| | | ||| || Sbjct 353640 CTCAGTCTGGGCATCAAGGATTGCATACCACAACTTTTGAGCCTTGACAGTC--TTTCTA 353583 Query 63104 TCTCCTTTCTCTTTCGTATAGTGT--ATACA-ATCGTTCGAACTCGTCTCCCCAAACATT 63160 | | |||||| ||| | ||| | | | || ||| || || || || || Sbjct 353582 CCACGACCTTCTTTCTCATACTTCTCATAAAGAGCCTT-GAATTCATCACCATAACAATC 353524 Query 63161 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63220 | | || || ||||| ||| | | ||| | ||| || || | | || || || Sbjct 353523 AGCAAGACCTGGTGCTTCATTTGGAGAGAACAAAGTCCATTCACCATTAGACTCAACACG 353464 Query 63221 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63280 || ||| || | |||||| ||||| | ||| || | ||| | | ||| || || Sbjct 353463 TTCCATGAACAAATCAGGGATCCACAATGCTGGGAACAAATCACGAGCTCTGATCTCTTC 353404 Query 63281 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63340 || || ||||||| ||| |||| ||| | | ||||| | ||||| |||||||| Sbjct 353403 TTTACCGTGATTCTTTCTAATGTCGATGAAATCAAAGATATCTGCGTGCCATGGTTCCAA 353344 Query 63341 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63400 || | ||| | | ||||| | ||||| || || || || | ||| | ||| ||||| Sbjct 353343 ATAAAGGGCAAATGCACCAGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTT 353284 Query 63401 ATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63460 ||| | || | | ||||||||| | |||||| || |||| || ||||| | || || Sbjct 353283 GTTAAAGACACGAACCATTGGAATCAAACCGTTAGAAGTACCGTTAGTACCAGCAATGTA 353224 Query 63461 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63520 || | || | || ||| || || ||| || || || || | || ||||| Sbjct 353223 AGAACCTGTAGCTCTAACGTTATGGATGTGTAAACCGATACCACCAGCGGTCTTGGAGAT 353164 Query 63521 TAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAG 63580 || || ||| |||| || || |||||||||||||| ||| ||| || |||| | Sbjct 353163 CAAGGCACATTGTTTCAAAGTCTCATAGATACCCTCGATGGAATCTTCTCTCATAGCCAC 353104 Query 63581 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63640 || ||||| ||||| || | | || || || || || || || |||||||| Sbjct 353103 AAGGAAACAAGAGGACATCTGTGGGTGTGGGGTACCAGCGTTGAACAAAGTTGGAGAAGC 353044 Query 63641 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63700 ||| || || || | ||||| | || || || ||||||||| |||| | ||||| | Sbjct 353043 GTGGGTGAAGTATCTCTCAGACATGAGGTTATAAGTCTCAATAACTGATTTAATATCTCT 352984 Query 63701 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63760 ||| || || | ||||| | ||| | || ||||| || | |||| ||| || Sbjct 352983 ACCATGGATACCGATAGCGACTCTCATGATCAAATGCTGTGGACGTTCAGCGACTTTACC 352924 Query 63761 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 63818 || | ||||||||| ||| | ||||| || || |||||||| ||||| || |||| Sbjct 352923 ATTAACACGCAACAAGTAAGATCTCTCCAATGTCTTGAAACCAAAGTAGTTATAGTTGAA 352864 Query 63819 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCC 63878 | |||| ||||| || || | |||| | | || || | | | ||| || | | Sbjct 352863 A--TCTCTATCGTAGATGATGGCAGAGTCCAACTCGTCTTTGAACTCTTGAACAATGT-C 352807 Query 63879 ATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63937 || | ||| || | ||||||||||| | | || || |||| |||||| | Sbjct 352806 ATAAGTTTCCTTAGACAACATCGGAGAATGGAGATCGGTCTTTGGGTTAATGTAGTTGTA 352747 Query 63938 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGC 63997 | || || | || | || |||| | |||| ||| || | ||| || | ||| Sbjct 352746 AAGCTCTTCGACAACAGAAGAGAACTGTTTAGTGGTTTGCTTATGCAAATTAGAGATGGC 352687 Query 63998 TATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 ||||| || |||| | | ||||| || ||||| Sbjct 352686 AATTCTAGCAGCTAAAGTAGCATAGTCTGGATG 352654 >seq6 Length=680632 Score = 194 bits (214), Expect = 2e-44 Identities = 387/563 (69%), Gaps = 8/563 (1%) Strand=Plus/Minus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 ||||||| || || ||||| | |||||||||||| | ||||| ||||||||||| || | Sbjct 464880 ACTTGATTGTACCCAAATTCTTCTGATTACTCTTTCTATTACAAGCATCCTTATAGAGCA 464821 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCC 63086 |||| ||| ||||||||||| |||||||| | || | | ||| | | || ||||| Sbjct 464820 TGAAAGGACCACCAGTTTCAACTTGAGATTCCAAGATTGAGTGCCATAACTTCT-GAGCC 464762 Query 63087 TTTATTATAGA-TTTGTATCTCCTTTCTCTTTCGTATAGTGT-ATACAATCGTTCGAACT 63144 || || | |||| ||||| || | || ||| ||| ||||| | | | || | Sbjct 464761 TTAATCTTCTTCTTTGCCAATCCTTCCT-TCTCATATT-TGTGATACAGTTGAACAAATT 464704 Query 63145 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 63204 | || || | || | | ||| |||||| ||||| |||| | ||| |||| ||| Sbjct 464703 CTTCACCATACACCTCATTCAAACCAGGAGCATCATCTGGACTAAACAAGCACCATTCTT 464644 Query 63205 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63264 | || | || ||| || ||| || ||||| || ||||| ||||| ||| | ||| | Sbjct 464643 CATCTTTCTCAACTTTTTCCATGAATAGATCTGGGATCCATAGAGCATAAAACAAATCAC 464584 Query 63265 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTT-TTAAGATCGAGGAACGCCATAATATCA 63323 | ||| || || ||||| |||||| ||||| | || || |||| | |||| Sbjct 464583 GAGCTCTCATCTCTTCCTTTCCATGATTCTTCCTTAAGTTTAAGAAAT-CCATCACATCA 464525 Query 63324 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 63383 | |||||| |||||||| || ||||| | | || || | || || || || ||||| Sbjct 464524 GCATGCCATGGTTCCAAATAGATGGCAAATGCACCTGGTCTCTTATTACCACCTTGATCA 464465 Query 63384 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCA 63443 | ||||| |||||||||||| | ||||| | ||| || | ||||||||||| ||||| Sbjct 464464 ACATATCTTGCGGTGTTATTAAACACTCTAAGCATAGGTACGATACCGTTTGAAGTACCA 464405 Query 63444 TTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCC 63503 || | |||| || || ||| |||| | ||| || || |||||| || || Sbjct 464404 TTTGATCCGGCAATGTATGCACCAGTGGCTCTAATGCTAGATATATGTAGACCGATACCA 464345 Query 63504 CCTGCCATTTTAGAGATTAATGC 63526 || || || |||||||| || Sbjct 464344 CCAGCAGCCTTCGAGATTAAAGC 464322 Score = 181 bits (200), Expect = 1e-40 Identities = 406/606 (67%), Gaps = 8/606 (1%) Strand=Plus/Minus Query 33286 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 33345 ||||| ||||| |||||| || || || ||||| ||| || || | | ||| | Sbjct 382411 AAATGAGCAAACAACAAACAGGCAAAGTCAGTGTGCAAACCTTCATCACGGCAAATCAAC 382352 Query 33346 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33405 || || || || || | || ||||| | || | ||| || | ||| || || || || Sbjct 382351 TCATTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAGGCA 382292 Query 33406 AATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33465 || || ||||| |||||||| ||||| || || |||||||||| ||||||||| || | Sbjct 382291 AAGGAACCAGAGAAGAAGATACCTTCAACAGCGGCAAAGGCAACAAGTCTCTCACCGAAC 382232 Query 33466 CCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33522 ||| |||| ||||| | ||||||||| |||||||| || | ||| || Sbjct 382231 AAGGCTTCTTCATCGGCAATCCATCTCAAAGCCCAATCAGCCTTCTTCTTAATACATGGA 382172 Query 33523 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33582 || || || ||||||||||| | ||| | | | ||| || | |||||| || Sbjct 382171 ATAGTCTCAATGGCATTAAACAAATACTCAGCCTGTTGTGGATCCTTGATATAAGTGTCA 382112 Query 33583 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33642 ||||| ||| || | || || |||||||| || || || || || ||||||||| Sbjct 382111 ATCAAGAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAA 382052 Query 33643 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACT 33702 || |||| || | ||| || || || | | | || || |||| || ||||| || Sbjct 382051 CACTTAGCTTCTGGAATTTGCACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCATTAACG 381992 Query 33703 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT-AAAATATTTTTCGTCTGG 33761 || |||||| || ||||| || || | ||| | || || | | || ||| Sbjct 381991 ATACCGTCAGAAGCGGCAAAGAAGGCAAGAACACGAGAGATGAAGAAACGTTCATTCTCA 381932 Query 33762 TGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCA 33818 | | | | || |||||||||| | ||| ||||| | ||| | || || | ||||| Sbjct 381931 T-TCAATCTGTTGTTCCAATCATGCAAATCCTTAGACAAATCAATCTCCTCAGCGGTCCA 381873 Query 33819 AAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAAT 33878 || || || || ||||| || || | |||||| |||| || | ||||||||||| Sbjct 381872 GAAAGAAGCTTCAGCCTTCTTGTATGCCTGCCAGATCTCATGGTACTTGATTGGGAAAAG 381813 Query 33879 AACAAA 33884 |||||| Sbjct 381812 AACAAA 381807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947005329000